Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 AL049812.1-201ENST00000432563 2267 ntBASIC19.53■□□□□ 0.72
MT-ND3P03897 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
MT-ND3P03897 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-ND3P03897 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 AC018553.1-201ENST00000616682 1458 ntBASIC19.53■□□□□ 0.72
MT-ND3P03897 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.53■□□□□ 0.72
MT-ND3P03897 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
MT-ND3P03897 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
MT-ND3P03897 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-ND3P03897 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MT-ND3P03897 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
MT-ND3P03897 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.52■□□□□ 0.72
MT-ND3P03897 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.52■□□□□ 0.72
MT-ND3P03897 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
MT-ND3P03897 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.52■□□□□ 0.72
MT-ND3P03897 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
MT-ND3P03897 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
MT-ND3P03897 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
MT-ND3P03897 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-ND3P03897 AC128676.1-201ENST00000454392 318 ntBASIC19.52■□□□□ 0.72
MT-ND3P03897 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 AC141586.3-201ENST00000562166 1838 ntBASIC19.52■□□□□ 0.72
MT-ND3P03897 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
MT-ND3P03897 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.52■□□□□ 0.72
MT-ND3P03897 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
MT-ND3P03897 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.52■□□□□ 0.72
MT-ND3P03897 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND3P03897 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND3P03897 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
MT-ND3P03897 AC006333.2-201ENST00000607957 2099 ntBASIC19.52■□□□□ 0.71
MT-ND3P03897 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND3P03897 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.51■□□□□ 0.71
MT-ND3P03897 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.51■□□□□ 0.71
MT-ND3P03897 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND3P03897 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 TEX21P-204ENST00000641479 1693 ntBASIC19.51■□□□□ 0.71
MT-ND3P03897 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
MT-ND3P03897 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
MT-ND3P03897 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
MT-ND3P03897 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
MT-ND3P03897 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-ND3P03897 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-ND3P03897 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.5■□□□□ 0.71
MT-ND3P03897 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
MT-ND3P03897 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
MT-ND3P03897 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.5■□□□□ 0.71
MT-ND3P03897 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms