Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRUB2O95900 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.13■□□□□ 0.81
TRUB2O95900 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
TRUB2O95900 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRUB2O95900 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.12■□□□□ 0.81
TRUB2O95900 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
TRUB2O95900 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.12■□□□□ 0.81
TRUB2O95900 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.12■□□□□ 0.81
TRUB2O95900 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TRUB2O95900 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 NUDT16P1-203ENST00000513809 620 ntBASIC20.12■□□□□ 0.81
TRUB2O95900 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.12■□□□□ 0.81
TRUB2O95900 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.12■□□□□ 0.81
TRUB2O95900 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.12■□□□□ 0.81
TRUB2O95900 AC026271.3-201ENST00000571884 352 ntBASIC20.12■□□□□ 0.81
TRUB2O95900 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRUB2O95900 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.12■□□□□ 0.81
TRUB2O95900 AC026471.5-201ENST00000615068 467 ntBASIC20.12■□□□□ 0.81
TRUB2O95900 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.12■□□□□ 0.81
TRUB2O95900 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRUB2O95900 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
TRUB2O95900 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRUB2O95900 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.11■□□□□ 0.81
TRUB2O95900 AL355355.2-201ENST00000442321 338 ntBASIC20.11■□□□□ 0.81
TRUB2O95900 Z85996.1-201ENST00000494644 937 ntBASIC20.11■□□□□ 0.81
TRUB2O95900 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 MIR4785-201ENST00000585005 73 ntBASIC20.11■□□□□ 0.81
TRUB2O95900 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
TRUB2O95900 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.11■□□□□ 0.81
TRUB2O95900 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.11■□□□□ 0.81
TRUB2O95900 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRUB2O95900 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRUB2O95900 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRUB2O95900 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.1■□□□□ 0.81
TRUB2O95900 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRUB2O95900 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.1■□□□□ 0.81
TRUB2O95900 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TRUB2O95900 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRUB2O95900 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRUB2O95900 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
TRUB2O95900 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.09■□□□□ 0.81
TRUB2O95900 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRUB2O95900 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TRUB2O95900 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRUB2O95900 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.09■□□□□ 0.81
TRUB2O95900 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.09■□□□□ 0.81
TRUB2O95900 AP003071.4-201ENST00000562276 1284 ntBASIC20.09■□□□□ 0.81
TRUB2O95900 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.09■□□□□ 0.81
TRUB2O95900 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRUB2O95900 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TRUB2O95900 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.09■□□□□ 0.81
TRUB2O95900 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms