Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.45■□□□□ 0.54
PRICKLE3O43900 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PRICKLE3O43900 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.44■□□□□ 0.54
PRICKLE3O43900 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 PRSS44-201ENST00000515154 1146 ntBASIC18.44■□□□□ 0.54
PRICKLE3O43900 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.44■□□□□ 0.54
PRICKLE3O43900 AC116562.4-201ENST00000641316 2276 ntBASIC18.44■□□□□ 0.54
PRICKLE3O43900 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.44■□□□□ 0.54
PRICKLE3O43900 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PRICKLE3O43900 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 KRT8P9-201ENST00000558927 1449 ntBASIC18.43■□□□□ 0.54
PRICKLE3O43900 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 AL390955.1-201ENST00000428694 934 ntBASIC18.43■□□□□ 0.54
PRICKLE3O43900 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 SLC25A1P4-201ENST00000567977 778 ntBASIC18.43■□□□□ 0.54
PRICKLE3O43900 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 AC141586.3-201ENST00000562166 1838 ntBASIC18.43■□□□□ 0.54
PRICKLE3O43900 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.43■□□□□ 0.54
PRICKLE3O43900 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRICKLE3O43900 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.43■□□□□ 0.54
PRICKLE3O43900 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.42■□□□□ 0.54
PRICKLE3O43900 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 MMP23A-201ENST00000234610 1017 ntBASIC18.42■□□□□ 0.54
PRICKLE3O43900 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 MIR1238-201ENST00000408483 83 ntBASIC18.42■□□□□ 0.54
PRICKLE3O43900 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.42■□□□□ 0.54
PRICKLE3O43900 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRICKLE3O43900 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PRICKLE3O43900 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRICKLE3O43900 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms