Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFS4O43181 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFS4O43181 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDUFS4O43181 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS4O43181 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NDUFS4O43181 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NDUFS4O43181 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 TEX21P-204ENST00000641479 1693 ntBASIC18.39■□□□□ 0.53
NDUFS4O43181 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.39■□□□□ 0.53
NDUFS4O43181 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS4O43181 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.39■□□□□ 0.53
NDUFS4O43181 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.39■□□□□ 0.53
NDUFS4O43181 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.39■□□□□ 0.53
NDUFS4O43181 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.39■□□□□ 0.53
NDUFS4O43181 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NDUFS4O43181 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDUFS4O43181 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
NDUFS4O43181 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NDUFS4O43181 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 Z85996.1-201ENST00000494644 937 ntBASIC18.38■□□□□ 0.53
NDUFS4O43181 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.38■□□□□ 0.53
NDUFS4O43181 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.38■□□□□ 0.53
NDUFS4O43181 AC026271.3-201ENST00000571884 352 ntBASIC18.38■□□□□ 0.53
NDUFS4O43181 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.38■□□□□ 0.53
NDUFS4O43181 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.38■□□□□ 0.53
NDUFS4O43181 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDUFS4O43181 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDUFS4O43181 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.37■□□□□ 0.53
NDUFS4O43181 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NDUFS4O43181 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.37■□□□□ 0.53
NDUFS4O43181 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.37■□□□□ 0.53
NDUFS4O43181 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.37■□□□□ 0.53
NDUFS4O43181 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NDUFS4O43181 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NDUFS4O43181 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.37■□□□□ 0.53
NDUFS4O43181 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
NDUFS4O43181 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDUFS4O43181 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.37■□□□□ 0.53
NDUFS4O43181 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFS4O43181 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
NDUFS4O43181 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDUFS4O43181 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms