Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC3O15379 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 AC005181.1-201ENST00000604782 1256 ntBASIC18.68■□□□□ 0.58
HDAC3O15379 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC3O15379 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC3O15379 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
HDAC3O15379 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC3O15379 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HDAC3O15379 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.68■□□□□ 0.58
HDAC3O15379 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.68■□□□□ 0.58
HDAC3O15379 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
HDAC3O15379 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.67■□□□□ 0.58
HDAC3O15379 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.67■□□□□ 0.58
HDAC3O15379 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.67■□□□□ 0.58
HDAC3O15379 AC133552.2-202ENST00000575694 574 ntBASIC18.67■□□□□ 0.58
HDAC3O15379 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
HDAC3O15379 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
HDAC3O15379 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.67■□□□□ 0.58
HDAC3O15379 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HDAC3O15379 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HDAC3O15379 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC3O15379 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.66■□□□□ 0.58
HDAC3O15379 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HDAC3O15379 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.66■□□□□ 0.58
HDAC3O15379 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HDAC3O15379 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HDAC3O15379 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.66■□□□□ 0.58
HDAC3O15379 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
HDAC3O15379 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC3O15379 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
HDAC3O15379 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC3O15379 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.65■□□□□ 0.58
HDAC3O15379 YBX1P10-201ENST00000444752 975 ntBASIC18.65■□□□□ 0.58
HDAC3O15379 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.65■□□□□ 0.58
HDAC3O15379 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 NOC2LP1-202ENST00000452600 2235 ntBASIC18.65■□□□□ 0.58
HDAC3O15379 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC3O15379 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HDAC3O15379 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC3O15379 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.65■□□□□ 0.58
HDAC3O15379 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms