Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC32.91■■■□□ 2.86
CUX2O14529 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC32.91■■■□□ 2.86
CUX2O14529 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC32.91■■■□□ 2.86
CUX2O14529 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC32.9■■■□□ 2.86
CUX2O14529 PLK5-205ENST00000642079 1969 ntBASIC32.9■■■□□ 2.86
CUX2O14529 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 FAM8A3P-201ENST00000427218 844 ntBASIC32.9■■■□□ 2.86
CUX2O14529 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC32.9■■■□□ 2.86
CUX2O14529 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC32.9■■■□□ 2.86
CUX2O14529 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC32.9■■■□□ 2.86
CUX2O14529 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
CUX2O14529 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
CUX2O14529 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC32.9■■■□□ 2.86
CUX2O14529 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC32.89■■■□□ 2.86
CUX2O14529 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC32.89■■■□□ 2.86
CUX2O14529 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC32.89■■■□□ 2.86
CUX2O14529 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CUX2O14529 AC145285.3-201ENST00000564603 959 ntBASIC32.89■■■□□ 2.86
CUX2O14529 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC32.89■■■□□ 2.86
CUX2O14529 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CUX2O14529 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CUX2O14529 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CUX2O14529 FBXW4P1-201ENST00000426721 2239 ntBASIC32.89■■■□□ 2.85
CUX2O14529 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CUX2O14529 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC32.88■■■□□ 2.85
CUX2O14529 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC32.88■■■□□ 2.85
CUX2O14529 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
CUX2O14529 IGHV3-47-201ENST00000425060 335 ntBASIC32.88■■■□□ 2.85
CUX2O14529 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC32.88■■■□□ 2.85
CUX2O14529 FIS1-203ENST00000442303 631 ntTSL 3 BASIC32.88■■■□□ 2.85
CUX2O14529 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
CUX2O14529 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CUX2O14529 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
CUX2O14529 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC32.88■■■□□ 2.85
CUX2O14529 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CUX2O14529 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
CUX2O14529 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CUX2O14529 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CUX2O14529 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CUX2O14529 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC32.87■■■□□ 2.85
CUX2O14529 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC32.87■■■□□ 2.85
CUX2O14529 DPP3P2-201ENST00000416030 1696 ntBASIC32.87■■■□□ 2.85
CUX2O14529 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CUX2O14529 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
CUX2O14529 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CUX2O14529 BAALC-202ENST00000306391 243 ntTSL 5 BASIC32.86■■■□□ 2.85
CUX2O14529 BAALC-204ENST00000330955 222 ntTSL 5 BASIC32.86■■■□□ 2.85
CUX2O14529 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CUX2O14529 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CUX2O14529 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC32.86■■■□□ 2.85
CUX2O14529 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC32.86■■■□□ 2.85
CUX2O14529 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC32.86■■■□□ 2.85
CUX2O14529 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
CUX2O14529 AL049840.3-201ENST00000602669 611 ntBASIC32.86■■■□□ 2.85
CUX2O14529 AC134684.3-201ENST00000641758 218 ntBASIC32.86■■■□□ 2.85
CUX2O14529 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC32.85■■■□□ 2.85
CUX2O14529 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC32.85■■■□□ 2.85
CUX2O14529 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CUX2O14529 YBX2P1-201ENST00000394192 760 ntBASIC32.85■■■□□ 2.85
CUX2O14529 AL160286.2-201ENST00000567150 934 ntBASIC32.85■■■□□ 2.85
CUX2O14529 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC32.85■■■□□ 2.85
CUX2O14529 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC32.85■■■□□ 2.85
CUX2O14529 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CUX2O14529 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CUX2O14529 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC32.85■■■□□ 2.85
CUX2O14529 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CUX2O14529 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC32.84■■■□□ 2.85
CUX2O14529 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CUX2O14529 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC32.84■■■□□ 2.85
CUX2O14529 LBH-203ENST00000404397 543 ntTSL 4 BASIC32.84■■■□□ 2.85
CUX2O14529 LBH-204ENST00000406087 559 ntTSL 4 BASIC32.84■■■□□ 2.85
CUX2O14529 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC32.84■■■□□ 2.85
CUX2O14529 Z69720.1-201ENST00000601483 472 ntBASIC32.84■■■□□ 2.85
CUX2O14529 CAND2-206ENST00000626378 333 ntTSL 5 BASIC32.84■■■□□ 2.85
CUX2O14529 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CUX2O14529 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC32.84■■■□□ 2.85
CUX2O14529 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC32.83■■■□□ 2.85
CUX2O14529 FAM197Y3-203ENST00000618346 717 ntBASIC32.83■■■□□ 2.85
CUX2O14529 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC32.83■■■□□ 2.85
CUX2O14529 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC32.83■■■□□ 2.85
CUX2O14529 ERF-202ENST00000440177 2032 ntTSL 2 BASIC32.82■■■□□ 2.85
CUX2O14529 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.85
CUX2O14529 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC32.82■■■□□ 2.85
CUX2O14529 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CUX2O14529 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CUX2O14529 NMU-202ENST00000505262 693 ntTSL 3 BASIC32.82■■■□□ 2.84
CUX2O14529 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC32.82■■■□□ 2.84
CUX2O14529 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC32.82■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms