Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
UPK2O00526 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UPK2O00526 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
UPK2O00526 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.4■□□□□ 0.06
UPK2O00526 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.4■□□□□ 0.06
UPK2O00526 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
UPK2O00526 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.4■□□□□ 0.06
UPK2O00526 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
UPK2O00526 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UPK2O00526 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 UNC93B4-201ENST00000505679 747 ntBASIC15.4■□□□□ 0.06
UPK2O00526 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
UPK2O00526 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.4■□□□□ 0.06
UPK2O00526 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
UPK2O00526 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.4■□□□□ 0.06
UPK2O00526 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
UPK2O00526 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UPK2O00526 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK2O00526 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK2O00526 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15.39■□□□□ 0.05
UPK2O00526 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK2O00526 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.39■□□□□ 0.05
UPK2O00526 AC142086.2-201ENST00000569753 217 ntBASIC15.39■□□□□ 0.05
UPK2O00526 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK2O00526 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK2O00526 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 FEM1AP3-201ENST00000403722 1741 ntBASIC15.39■□□□□ 0.05
UPK2O00526 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.39■□□□□ 0.05
UPK2O00526 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 HCG11-201ENST00000411553 5696 ntBASIC15.39■□□□□ 0.05
UPK2O00526 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
UPK2O00526 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
UPK2O00526 AC020763.4-201ENST00000623414 4170 ntBASIC15.39■□□□□ 0.05
UPK2O00526 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UPK2O00526 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK2O00526 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
UPK2O00526 AC093525.10-201ENST00000625130 1569 ntBASIC15.38■□□□□ 0.05
UPK2O00526 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
UPK2O00526 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 PRKY-204ENST00000533551 1019 ntBASIC15.38■□□□□ 0.05
UPK2O00526 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.38■□□□□ 0.05
UPK2O00526 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.38■□□□□ 0.05
UPK2O00526 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK2O00526 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.38■□□□□ 0.05
UPK2O00526 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
UPK2O00526 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.38■□□□□ 0.05
UPK2O00526 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
UPK2O00526 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms