Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 AC120498.10-201ENST00000621827 505 ntBASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 GNAS-203ENST00000306120 1878 ntBASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RBFOX3A6NFN3 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 IRX1P1-201ENST00000438849 1838 ntBASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.15■□□□□ 0.02
RBFOX3A6NFN3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.02
RBFOX3A6NFN3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 AC007322.3-201ENST00000426526 701 ntBASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RBFOX3A6NFN3 AC084018.2-201ENST00000613093 2607 ntBASIC15.13■□□□□ 0.01
RBFOX3A6NFN3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBFOX3A6NFN3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBFOX3A6NFN3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.13■□□□□ 0.01
RBFOX3A6NFN3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RBFOX3A6NFN3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RBFOX3A6NFN3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms