Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 C1QL1P1-201ENST00000568105 661 ntBASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRIM49BA6NDI0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 UBQLN4P1-201ENST00000461599 1801 ntBASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 KRT17P3-201ENST00000420566 1262 ntBASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 AL023875.1-201ENST00000640777 796 ntBASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 AL138781.2-201ENST00000617896 1843 ntBASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRIM49BA6NDI0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.14■□□□□ 0.98
TRIM49BA6NDI0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
TRIM49BA6NDI0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TRIM49BA6NDI0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 AC104581.1-202ENST00000635932 2618 ntBASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRIM49BA6NDI0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms