Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SLC29A4P1-201ENST00000398760 971 ntBASIC19.19■□□□□ 0.66
CCDC189A1A4V9 NCF1B-203ENST00000435988 1254 ntBASIC19.19■□□□□ 0.66
CCDC189A1A4V9 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC189A1A4V9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC189A1A4V9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 AC009053.2-201ENST00000563701 2365 ntBASIC19.17■□□□□ 0.66
CCDC189A1A4V9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 TSPY6P-201ENST00000448518 926 ntBASIC19.17■□□□□ 0.66
CCDC189A1A4V9 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.17■□□□□ 0.66
CCDC189A1A4V9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 MYC-209ENST00000641252 345 ntBASIC19.17■□□□□ 0.66
CCDC189A1A4V9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC189A1A4V9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 GUSBP6-202ENST00000438529 1198 ntBASIC19.16■□□□□ 0.66
CCDC189A1A4V9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 AL121906.2-201ENST00000621597 723 ntBASIC19.16■□□□□ 0.66
CCDC189A1A4V9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC189A1A4V9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC189A1A4V9 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.15■□□□□ 0.66
CCDC189A1A4V9 AC097658.1-201ENST00000475555 843 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms