Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 ANO7L1-203ENST00000602586 1720 ntBASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 AC020916.1-201ENST00000587762 1774 ntBASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 HCG11-201ENST00000411553 5696 ntBASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC13.57□□□□□ -0.24
TRBV27A0A0K0K1C4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 ABALON-201ENST00000629058 1903 ntBASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 AC073210.2-201ENST00000430369 194 ntBASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 BID-214ENST00000617586 542 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 AC083906.6-201ENST00000641366 219 ntBASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
TRBV27A0A0K0K1C4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 AC068880.1-201ENST00000507289 2297 ntBASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 AC137761.2-201ENST00000561729 223 ntBASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 AC145350.3-201ENST00000569033 163 ntBASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.55□□□□□ -0.24
TRBV27A0A0K0K1C4 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms