Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 ZNF815P-204ENST00000434898 1737 ntBASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
TRAV12-3A0A0B4J271 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 AC069152.1-201ENST00000438030 544 ntBASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 YBX1P10-201ENST00000444752 975 ntBASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 AC090192.1-201ENST00000517740 490 ntBASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 AC120498.8-201ENST00000614275 531 ntBASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV12-3A0A0B4J271 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV12-3A0A0B4J271 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 AC104771.1-201ENST00000603335 964 ntBASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
TRAV12-3A0A0B4J271 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
TRAV12-3A0A0B4J271 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms