Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 KRT18P35-201ENST00000510488 1269 ntBASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 CKBP1-201ENST00000565489 1086 ntBASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 NT5C-211ENST00000582170 653 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV10A0A0B4J240 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 LINC01465-201ENST00000408887 1940 ntBASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 BCL2-203ENST00000589955 5011 ntBASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 DUX4L26-201ENST00000489078 1255 ntBASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV10A0A0B4J240 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV10A0A0B4J240 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV10A0A0B4J240 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV10A0A0B4J240 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV10A0A0B4J240 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TRAV10A0A0B4J240 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV10A0A0B4J240 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 AC007663.1-201ENST00000438948 1240 ntBASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 AL353719.1-201ENST00000566847 864 ntBASIC13.52□□□□□ -0.25
TRAV10A0A0B4J240 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms