Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 AL445675.2-201ENST00000620291 557 ntBASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV2A0A0B4J234 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 NIFKP9-201ENST00000419265 221 ntBASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 GCSHP5-201ENST00000443090 522 ntBASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 KSR1P1-201ENST00000446298 240 ntBASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 AP002982.1-201ENST00000492365 877 ntBASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 AC142381.4-202ENST00000563973 229 ntBASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
TRAV2A0A0B4J234 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 HTR7P1-201ENST00000538670 1336 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AL160286.2-201ENST00000567150 934 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AP001412.1-201ENST00000608405 714 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 HLA-A-209ENST00000638375 975 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AL020996.1-203ENST00000536896 2307 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AFG3L1P-217ENST00000557444 2447 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 AC104417.2-201ENST00000562989 1793 ntBASIC14.5□□□□□ -0.09
TRAV2A0A0B4J234 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 PWWP2AP1-201ENST00000429776 2273 ntBASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV2A0A0B4J234 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms