Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 FAM201B-201ENST00000458407 597 ntBASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ITM2C-210ENST00000620962 501 ntBASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HTR7P1-201ENST00000538670 1336 ntBASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 KRT8P41-201ENST00000533985 1514 ntBASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AC120498.9-201ENST00000339021 3867 ntBASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 AL359736.2-201ENST00000621992 437 ntBASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IGKV1D-43A0A0B4J1Z2 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CROCCP3-202ENST00000420820 1947 ntBASIC16.96■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 Z85996.1-201ENST00000494644 937 ntBASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FEM1AP3-201ENST00000403722 1741 ntBASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KRT18P29-201ENST00000397031 1267 ntBASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TSPY23P-201ENST00000440136 739 ntBASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC098590.1-201ENST00000468126 897 ntBASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 RPS2P4-201ENST00000476944 856 ntBASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
IGKV1D-43A0A0B4J1Z2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms