Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-583P-201ENST00000516012 92 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RN7SKP83-201ENST00000516512 178 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RNU7-30P-201ENST00000516835 62 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RNU6-445P-201ENST00000516949 107 ntBASIC6.05□□□□□ -1.44
RXRBP28702 RNU6-709P-201ENST00000517257 104 ntBASIC6.05□□□□□ -1.44
RXRBP28702 OR5B19P-201ENST00000531766 928 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.05□□□□□ -1.44
RXRBP28702 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.05□□□□□ -1.44
RXRBP28702 AC055876.1-202ENST00000567053 138 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC6.05□□□□□ -1.44
RXRBP28702 AC243960.4-201ENST00000600532 288 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC007687.1-201ENST00000602704 304 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC008638.3-201ENST00000603341 463 ntBASIC6.05□□□□□ -1.44
RXRBP28702 BCRP9-201ENST00000605312 388 ntBASIC6.05□□□□□ -1.44
RXRBP28702 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RXRBP28702 AL732618.1-201ENST00000623251 301 ntBASIC6.05□□□□□ -1.44
RXRBP28702 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 AC138649.5-201ENST00000637456 137 ntBASIC6.05□□□□□ -1.44
RXRBP28702 LINC00561-201ENST00000565815 2738 ntBASIC6.05□□□□□ -1.44
RXRBP28702 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 AC063976.2-201ENST00000425667 3556 ntBASIC6.05□□□□□ -1.44
RXRBP28702 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RXRBP28702 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 RLIMP2-201ENST00000427891 1563 ntBASIC6.05□□□□□ -1.44
RXRBP28702 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RXRBP28702 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RXRBP28702 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
RXRBP28702 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 RLIMP1-201ENST00000339626 1680 ntBASIC6.04□□□□□ -1.44
RXRBP28702 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 RNA5SP130-201ENST00000364431 114 ntBASIC6.04□□□□□ -1.44
RXRBP28702 RNU6-474P-201ENST00000384243 107 ntBASIC6.04□□□□□ -1.44
RXRBP28702 RNU6-463P-201ENST00000384340 107 ntBASIC6.04□□□□□ -1.44
RXRBP28702 SNORD115.1-201ENST00000391109 76 ntBASIC6.04□□□□□ -1.44
RXRBP28702 RN7SKP32-201ENST00000410167 303 ntBASIC6.04□□□□□ -1.44
RXRBP28702 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.04□□□□□ -1.44
RXRBP28702 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 AC133104.1-201ENST00000429100 218 ntBASIC6.04□□□□□ -1.44
RXRBP28702 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC6.04□□□□□ -1.44
RXRBP28702 TRGVB-201ENST00000453257 471 ntBASIC6.04□□□□□ -1.44
RXRBP28702 BTF3P5-201ENST00000457252 467 ntBASIC6.04□□□□□ -1.44
RXRBP28702 Y_RNA.632-201ENST00000459189 102 ntBASIC6.04□□□□□ -1.44
RXRBP28702 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.04□□□□□ -1.44
RXRBP28702 TRBV8-2-201ENST00000475637 270 ntBASIC6.04□□□□□ -1.44
RXRBP28702 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.04□□□□□ -1.44
RXRBP28702 AC112206.3-201ENST00000514578 389 ntBASIC6.04□□□□□ -1.44
RXRBP28702 IFITM8P-201ENST00000522529 394 ntBASIC6.04□□□□□ -1.44
RXRBP28702 AC068587.4-201ENST00000533893 186 ntBASIC6.04□□□□□ -1.44
RXRBP28702 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.04□□□□□ -1.44
RXRBP28702 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.04□□□□□ -1.44
RXRBP28702 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC6.04□□□□□ -1.44
RXRBP28702 AC068790.5-201ENST00000602741 355 ntBASIC6.04□□□□□ -1.44
RXRBP28702 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC6.04□□□□□ -1.44
RXRBP28702 AC015712.7-201ENST00000615211 635 ntBASIC6.04□□□□□ -1.44
RXRBP28702 RMST_7.1-201ENST00000621935 268 ntBASIC6.04□□□□□ -1.44
RXRBP28702 AP006248.2-201ENST00000623309 592 ntBASIC6.04□□□□□ -1.44
RXRBP28702 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RXRBP28702 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.04□□□□□ -1.44
RXRBP28702 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC6.04□□□□□ -1.44
RXRBP28702 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.03□□□□□ -1.44
RXRBP28702 AL158163.1-201ENST00000603915 1649 ntBASIC6.03□□□□□ -1.44
RXRBP28702 MAPK10-328ENST00000641553 4009 ntBASIC6.03□□□□□ -1.44
RXRBP28702 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RXRBP28702 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
RXRBP28702 OR5J1P-201ENST00000313544 939 ntBASIC6.03□□□□□ -1.44
RXRBP28702 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RXRBP28702 Y_RNA.381-201ENST00000365666 102 ntBASIC6.03□□□□□ -1.44
RXRBP28702 RNU1-39P-201ENST00000383897 165 ntBASIC6.03□□□□□ -1.44
RXRBP28702 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.03□□□□□ -1.44
RXRBP28702 SPA17P1-201ENST00000416656 452 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC073136.2-201ENST00000417282 849 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AC068533.1-201ENST00000418542 415 ntBASIC6.03□□□□□ -1.44
RXRBP28702 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC6.03□□□□□ -1.44
RXRBP28702 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC6.03□□□□□ -1.44
RXRBP28702 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC6.03□□□□□ -1.44
RXRBP28702 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.03□□□□□ -1.44
RXRBP28702 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.03□□□□□ -1.44
RXRBP28702 RPL7P59-201ENST00000447700 943 ntBASIC6.03□□□□□ -1.44
RXRBP28702 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.03□□□□□ -1.44
RXRBP28702 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.03□□□□□ -1.44
RXRBP28702 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms