RNA–Protein interactions for RNA: ENST00000458174.6

LMNTD1-204, Transcript of lamin tail domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LMNTD1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-204ENST00000458174 AEBP2Q6ZN18 517 aaPredicted RBP19.86■□□□□ 0.77
LMNTD1-204ENST00000458174 CHIC1Q5VXU3 224 aa18.57■□□□□ 0.56
LMNTD1-204ENST00000458174 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
LMNTD1-204ENST00000458174 PHF23Q9BUL5 403 aaPredicted RBP16.72■□□□□ 0.27
LMNTD1-204ENST00000458174 FOXD1Q16676 465 aa15.91■□□□□ 0.14
LMNTD1-204ENST00000458174 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
LMNTD1-204ENST00000458174 MSH5O43196 834 aa15.09■□□□□ 0.01
LMNTD1-204ENST00000458174 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
LMNTD1-204ENST00000458174 PIAS4Q8N2W9 510 aaPredicted RBP14.75□□□□□ -0.05
LMNTD1-204ENST00000458174 PPP6R1Q9UPN7 881 aa14.51□□□□□ -0.09
LMNTD1-204ENST00000458174 ADRA2BP18089 450 aa14.42□□□□□ -0.1
LMNTD1-204ENST00000458174 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
LMNTD1-204ENST00000458174 MAPK8IP2Q13387 824 aaPredicted RBP13.38□□□□□ -0.27
LMNTD1-204ENST00000458174 SCAF1Q9H7N4 1312 aaKnown RBP13.24□□□□□ -0.29
LMNTD1-204ENST00000458174 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
LMNTD1-204ENST00000458174 KCNA4P22459 653 aa13.21□□□□□ -0.29
LMNTD1-204ENST00000458174 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
LMNTD1-204ENST00000458174 NCBP3Q53F19 620 aaKnown RBP12.87□□□□□ -0.35
LMNTD1-204ENST00000458174 DCAF8L1A6NGE4 600 aa12.85□□□□□ -0.35
LMNTD1-204ENST00000458174 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
LMNTD1-204ENST00000458174 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
LMNTD1-204ENST00000458174 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
LMNTD1-204ENST00000458174 CNKSR2Q8WXI2 1034 aa12.77□□□□□ -0.37
LMNTD1-204ENST00000458174 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
LMNTD1-204ENST00000458174 SLC4A1APQ9BWU0 796 aaKnown RBP12.58□□□□□ -0.4
LMNTD1-204ENST00000458174 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
LMNTD1-204ENST00000458174 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
LMNTD1-204ENST00000458174 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
LMNTD1-204ENST00000458174 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
LMNTD1-204ENST00000458174 ZBTB22O15209 634 aa12.19□□□□□ -0.46
LMNTD1-204ENST00000458174 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.13□□□□□ -0.47
LMNTD1-204ENST00000458174 POTEHQ6S545 545 aa12.04□□□□□ -0.48
LMNTD1-204ENST00000458174 FOXD4L1Q9NU39 408 aa12.03□□□□□ -0.48
LMNTD1-204ENST00000458174 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
LMNTD1-204ENST00000458174 DSG3P32926 999 aa11.85□□□□□ -0.51
LMNTD1-204ENST00000458174 U3KPZ7 1027 aaPredicted RBP11.85□□□□□ -0.51
LMNTD1-204ENST00000458174 CAPN15O75808 1086 aa11.78□□□□□ -0.52
LMNTD1-204ENST00000458174 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
LMNTD1-204ENST00000458174 MYCNP04198 464 aaPredicted RBP11.74□□□□□ -0.53
LMNTD1-204ENST00000458174 ATXN8OSP0DMR3 200 aa11.53□□□□□ -0.56
LMNTD1-204ENST00000458174 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
LMNTD1-204ENST00000458174 APLP2Q06481 763 aa11.5□□□□□ -0.57
LMNTD1-204ENST00000458174 ZNF219Q9P2Y4 722 aaPredicted RBP11.49□□□□□ -0.57
LMNTD1-204ENST00000458174 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
LMNTD1-204ENST00000458174 TRHP20396 242 aaPredicted RBP11.48□□□□□ -0.57
LMNTD1-204ENST00000458174 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
LMNTD1-204ENST00000458174 SAMD1Q6SPF0 538 aaPredicted RBP11.48□□□□□ -0.57
LMNTD1-204ENST00000458174 ABCB7O75027 752 aa11.47□□□□□ -0.57
LMNTD1-204ENST00000458174 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
LMNTD1-204ENST00000458174 CHRDL2Q6WN34 429 aa11.24□□□□□ -0.61
LMNTD1-204ENST00000458174 POLA2Q14181 598 aa11.08□□□□□ -0.64
LMNTD1-204ENST00000458174 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
LMNTD1-204ENST00000458174 FKBP8Q14318 412 aa11.08□□□□□ -0.64
LMNTD1-204ENST00000458174 MKRN4PQ13434 485 aaPredicted RBP11□□□□□ -0.65
LMNTD1-204ENST00000458174 AKT1S1Q96B36 256 aa10.98□□□□□ -0.65
LMNTD1-204ENST00000458174 FBLN2P98095 1184 aa10.91□□□□□ -0.66
LMNTD1-204ENST00000458174 PIP4P2Q8N4L2 257 aa10.89□□□□□ -0.67
LMNTD1-204ENST00000458174 ZBTB12Q9Y330 459 aaPredicted RBP10.87□□□□□ -0.67
LMNTD1-204ENST00000458174 REM2Q8IYK8 340 aaPredicted RBP10.85□□□□□ -0.67
LMNTD1-204ENST00000458174 SPDYE4A6NLX3 237 aa10.82□□□□□ -0.68
LMNTD1-204ENST00000458174 HAX1O00165 279 aa10.78□□□□□ -0.68
LMNTD1-204ENST00000458174 FXR2P51116 673 aaKnown RBP eCLIP10.77□□□□□ -0.69
LMNTD1-204ENST00000458174 PITPNM1O00562 1244 aa10.75□□□□□ -0.69
LMNTD1-204ENST00000458174 OSCARQ8IYS5 282 aa10.75□□□□□ -0.69
LMNTD1-204ENST00000458174 PROM2Q8N271 834 aa10.64□□□□□ -0.71
LMNTD1-204ENST00000458174 EVX2Q03828 476 aa10.62□□□□□ -0.71
LMNTD1-204ENST00000458174 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
LMNTD1-204ENST00000458174 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
LMNTD1-204ENST00000458174 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
LMNTD1-204ENST00000458174 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
LMNTD1-204ENST00000458174 SSUH2Q9Y2M2 353 aa10.54□□□□□ -0.72
LMNTD1-204ENST00000458174 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
LMNTD1-204ENST00000458174 PABPN1Q86U42 306 aaKnown RBP eCLIP10.5□□□□□ -0.73
LMNTD1-204ENST00000458174 RTN4Q9NQC3 1192 aaKnown RBP10.49□□□□□ -0.73
LMNTD1-204ENST00000458174 PRKAR2AP13861 404 aaKnown RBP10.46□□□□□ -0.74
LMNTD1-204ENST00000458174 VASPP50552 380 aaPredicted RBP10.44□□□□□ -0.74
LMNTD1-204ENST00000458174 C19orf67A6NJJ6 358 aa10.44□□□□□ -0.74
LMNTD1-204ENST00000458174 AMER1Q5JTC6 1135 aaPredicted RBP10.41□□□□□ -0.74
LMNTD1-204ENST00000458174 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
LMNTD1-204ENST00000458174 LHX8Q68G74 356 aa10.38□□□□□ -0.75
LMNTD1-204ENST00000458174 GABBR2O75899 941 aa10.38□□□□□ -0.75
LMNTD1-204ENST00000458174 CLEC11AQ9Y240 323 aa10.36□□□□□ -0.75
LMNTD1-204ENST00000458174 IFNLR1Q8IU57 520 aaPredicted RBP10.34□□□□□ -0.75
LMNTD1-204ENST00000458174 STAG3Q9UJ98 1225 aa10.31□□□□□ -0.76
LMNTD1-204ENST00000458174 MIER1Q8N108 512 aa10.25□□□□□ -0.77
LMNTD1-204ENST00000458174 PLCD3Q8N3E9 789 aa10.25□□□□□ -0.77
LMNTD1-204ENST00000458174 CHADLQ6NUI6 762 aa10.22□□□□□ -0.77
LMNTD1-204ENST00000458174 KLHL34Q8N239 644 aa10.22□□□□□ -0.77
LMNTD1-204ENST00000458174 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
LMNTD1-204ENST00000458174 PRR29P0C7W0 189 aa10.15□□□□□ -0.79
LMNTD1-204ENST00000458174 SPOCK2Q92563 424 aa10.14□□□□□ -0.79
LMNTD1-204ENST00000458174 PLEKHG5O94827 1062 aa10.1□□□□□ -0.79
LMNTD1-204ENST00000458174 CD44P16070 742 aaKnown RBP10.1□□□□□ -0.79
LMNTD1-204ENST00000458174 CLCN6P51797 869 aa10.1□□□□□ -0.79
LMNTD1-204ENST00000458174 PKD2Q13563 968 aa10.09□□□□□ -0.79
LMNTD1-204ENST00000458174 CREBZFQ9NS37 354 aa10.07□□□□□ -0.8
LMNTD1-204ENST00000458174 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
LMNTD1-204ENST00000458174 FARP1Q9Y4F1 1045 aaPredicted RBP10.05□□□□□ -0.8
LMNTD1-204ENST00000458174 ZBTB47Q9UFB7 747 aaPredicted RBP10.04□□□□□ -0.8
LMNTD1-204ENST00000458174 MNX1P50219 401 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms