RNA–Protein interactions for RNA: ENST00000384243.1

RNU6-474P-201, Transcript of RNA, U6 small nuclear 474, pseudogene, humanhuman

BASIC

Gene RNU6-474P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-474P-201ENST00000384243 AEBP2Q6ZN18 517 aaPredicted RBP21.77■■□□□ 1.08
RNU6-474P-201ENST00000384243 CHIC1Q5VXU3 224 aa20.63■□□□□ 0.89
RNU6-474P-201ENST00000384243 SENP3Q9H4L4 574 aaPredicted RBP18.68■□□□□ 0.58
RNU6-474P-201ENST00000384243 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
RNU6-474P-201ENST00000384243 FOXD1Q16676 465 aa17.39■□□□□ 0.37
RNU6-474P-201ENST00000384243 PLPPR3Q6T4P5 718 aa16.48■□□□□ 0.23
RNU6-474P-201ENST00000384243 MSH5O43196 834 aa16.37■□□□□ 0.21
RNU6-474P-201ENST00000384243 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
RNU6-474P-201ENST00000384243 PPP6R1Q9UPN7 881 aa16.15■□□□□ 0.18
RNU6-474P-201ENST00000384243 ADRA2BP18089 450 aa16.13■□□□□ 0.17
RNU6-474P-201ENST00000384243 POTEDQ86YR6 584 aa16.11■□□□□ 0.17
RNU6-474P-201ENST00000384243 SCAF1Q9H7N4 1312 aaKnown RBP14.87□□□□□ -0.03
RNU6-474P-201ENST00000384243 MAPK8IP2Q13387 824 aaPredicted RBP14.84□□□□□ -0.03
RNU6-474P-201ENST00000384243 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
RNU6-474P-201ENST00000384243 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
RNU6-474P-201ENST00000384243 DCAF8L1A6NGE4 600 aa14.28□□□□□ -0.12
RNU6-474P-201ENST00000384243 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
RNU6-474P-201ENST00000384243 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
RNU6-474P-201ENST00000384243 CACNB1Q02641 598 aaPredicted RBP14.14□□□□□ -0.15
RNU6-474P-201ENST00000384243 RNF216Q9NWF9 866 aaPredicted RBP14.07□□□□□ -0.16
RNU6-474P-201ENST00000384243 NCBP3Q53F19 620 aaKnown RBP13.91□□□□□ -0.18
RNU6-474P-201ENST00000384243 RNF39Q9H2S5 420 aa13.9□□□□□ -0.18
RNU6-474P-201ENST00000384243 C1QBPQ07021 282 aaKnown RBP13.75□□□□□ -0.21
RNU6-474P-201ENST00000384243 DNAJC5BQ9UF47 199 aa13.71□□□□□ -0.21
RNU6-474P-201ENST00000384243 NPM3O75607 178 aaKnown RBP13.6□□□□□ -0.23
RNU6-474P-201ENST00000384243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.6□□□□□ -0.23
RNU6-474P-201ENST00000384243 KCNA4P22459 653 aa13.24□□□□□ -0.29
RNU6-474P-201ENST00000384243 U3KPZ7 1027 aaPredicted RBP13.2□□□□□ -0.3
RNU6-474P-201ENST00000384243 CAPN15O75808 1086 aa13.12□□□□□ -0.31
RNU6-474P-201ENST00000384243 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
RNU6-474P-201ENST00000384243 SLC4A2P04920 1241 aa12.99□□□□□ -0.33
RNU6-474P-201ENST00000384243 DSG3P32926 999 aa12.99□□□□□ -0.33
RNU6-474P-201ENST00000384243 APLP2Q06481 763 aa12.96□□□□□ -0.33
RNU6-474P-201ENST00000384243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.9□□□□□ -0.34
RNU6-474P-201ENST00000384243 HNRNPUL2Q1KMD3 747 aaKnown RBP12.9□□□□□ -0.34
RNU6-474P-201ENST00000384243 TRHP20396 242 aaPredicted RBP12.88□□□□□ -0.35
RNU6-474P-201ENST00000384243 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
RNU6-474P-201ENST00000384243 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
RNU6-474P-201ENST00000384243 ABCB7O75027 752 aa12.77□□□□□ -0.37
RNU6-474P-201ENST00000384243 POTEHQ6S545 545 aa12.63□□□□□ -0.39
RNU6-474P-201ENST00000384243 MYCNP04198 464 aaPredicted RBP12.62□□□□□ -0.39
RNU6-474P-201ENST00000384243 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
RNU6-474P-201ENST00000384243 POLA2Q14181 598 aa12.49□□□□□ -0.41
RNU6-474P-201ENST00000384243 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
RNU6-474P-201ENST00000384243 FOXD4L1Q9NU39 408 aa12.42□□□□□ -0.42
RNU6-474P-201ENST00000384243 ATF5Q9Y2D1 282 aaPredicted RBP12.27□□□□□ -0.45
RNU6-474P-201ENST00000384243 ZBTB12Q9Y330 459 aaPredicted RBP12.26□□□□□ -0.45
RNU6-474P-201ENST00000384243 CHRDL2Q6WN34 429 aa12.2□□□□□ -0.46
RNU6-474P-201ENST00000384243 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
RNU6-474P-201ENST00000384243 ZBTB22O15209 634 aa12.11□□□□□ -0.47
RNU6-474P-201ENST00000384243 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
RNU6-474P-201ENST00000384243 OSCARQ8IYS5 282 aa12.05□□□□□ -0.48
RNU6-474P-201ENST00000384243 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
RNU6-474P-201ENST00000384243 FBLN2P98095 1184 aa11.93□□□□□ -0.5
RNU6-474P-201ENST00000384243 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
RNU6-474P-201ENST00000384243 PIP4P2Q8N4L2 257 aa11.86□□□□□ -0.51
RNU6-474P-201ENST00000384243 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
RNU6-474P-201ENST00000384243 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
RNU6-474P-201ENST00000384243 SPDYE2Q495Y8 402 aa11.84□□□□□ -0.51
RNU6-474P-201ENST00000384243 FXR2P51116 673 aaKnown RBP eCLIP11.78□□□□□ -0.52
RNU6-474P-201ENST00000384243 SP7Q8TDD2 431 aaPredicted RBP11.78□□□□□ -0.52
RNU6-474P-201ENST00000384243 HAX1O00165 279 aa11.76□□□□□ -0.53
RNU6-474P-201ENST00000384243 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.53
RNU6-474P-201ENST00000384243 MKRN4PQ13434 485 aaPredicted RBP11.7□□□□□ -0.54
RNU6-474P-201ENST00000384243 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
RNU6-474P-201ENST00000384243 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
RNU6-474P-201ENST00000384243 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
RNU6-474P-201ENST00000384243 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
RNU6-474P-201ENST00000384243 PABPN1Q86U42 306 aaKnown RBP eCLIP11.51□□□□□ -0.57
RNU6-474P-201ENST00000384243 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
RNU6-474P-201ENST00000384243 EVX2Q03828 476 aa11.5□□□□□ -0.57
RNU6-474P-201ENST00000384243 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
RNU6-474P-201ENST00000384243 CHADLQ6NUI6 762 aa11.42□□□□□ -0.58
RNU6-474P-201ENST00000384243 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
RNU6-474P-201ENST00000384243 EHMT2Q96KQ7 1210 aa11.36□□□□□ -0.59
RNU6-474P-201ENST00000384243 GABBR2O75899 941 aa11.28□□□□□ -0.6
RNU6-474P-201ENST00000384243 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
RNU6-474P-201ENST00000384243 CD44P16070 742 aaKnown RBP11.22□□□□□ -0.61
RNU6-474P-201ENST00000384243 STAG3Q9UJ98 1225 aa11.22□□□□□ -0.61
RNU6-474P-201ENST00000384243 SPDYE4A6NLX3 237 aa11.18□□□□□ -0.62
RNU6-474P-201ENST00000384243 CLCN6P51797 869 aa11.12□□□□□ -0.63
RNU6-474P-201ENST00000384243 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
RNU6-474P-201ENST00000384243 LHX8Q68G74 356 aa11.08□□□□□ -0.64
RNU6-474P-201ENST00000384243 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
RNU6-474P-201ENST00000384243 DCBLD2Q96PD2 775 aa11.03□□□□□ -0.64
RNU6-474P-201ENST00000384243 ZNF579Q8NAF0 562 aaKnown RBP11.01□□□□□ -0.65
RNU6-474P-201ENST00000384243 PAK3O75914 559 aaPredicted RBP11□□□□□ -0.65
RNU6-474P-201ENST00000384243 NPM1P06748 294 aaKnown RBP eCLIP10.98□□□□□ -0.65
RNU6-474P-201ENST00000384243 POTEIP0CG38 1075 aa10.98□□□□□ -0.65
RNU6-474P-201ENST00000384243 GALR2O43603 387 aaPredicted RBP10.87□□□□□ -0.67
RNU6-474P-201ENST00000384243 PHF12Q96QT6 1004 aa10.85□□□□□ -0.67
RNU6-474P-201ENST00000384243 MNX1P50219 401 aaPredicted RBP10.84□□□□□ -0.67
RNU6-474P-201ENST00000384243 PROM2Q8N271 834 aa10.79□□□□□ -0.68
RNU6-474P-201ENST00000384243 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
RNU6-474P-201ENST00000384243 TSPYL2Q9H2G4 693 aaPredicted RBP10.75□□□□□ -0.69
RNU6-474P-201ENST00000384243 MIER1Q8N108 512 aa10.74□□□□□ -0.69
RNU6-474P-201ENST00000384243 MS4A3Q96HJ5 214 aa10.69□□□□□ -0.7
RNU6-474P-201ENST00000384243 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
RNU6-474P-201ENST00000384243 ASTLQ6HA08 431 aaPredicted RBP10.64□□□□□ -0.71
RNU6-474P-201ENST00000384243 PLCD3Q8N3E9 789 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms