RNA–Protein interactions for RNA: ENST00000439438.1

LINC00484-204, long intergenic non-protein coding RNA 484, humanhuman

TSL 3 BASIC

Gene LINC00484, Length 454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00484-204ENST00000439438 AEBP2Q6ZN18 517 aaPredicted RBP22.05■■□□□ 1.12
LINC00484-204ENST00000439438 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
LINC00484-204ENST00000439438 SENP3Q9H4L4 574 aaPredicted RBP19.03■□□□□ 0.64
LINC00484-204ENST00000439438 PHF23Q9BUL5 403 aaPredicted RBP18.66■□□□□ 0.58
LINC00484-204ENST00000439438 FOXD1Q16676 465 aa17.59■□□□□ 0.41
LINC00484-204ENST00000439438 PLPPR3Q6T4P5 718 aa16.83■□□□□ 0.28
LINC00484-204ENST00000439438 MSH5O43196 834 aa16.67■□□□□ 0.26
LINC00484-204ENST00000439438 PIAS4Q8N2W9 510 aaPredicted RBP16.45■□□□□ 0.22
LINC00484-204ENST00000439438 PPP6R1Q9UPN7 881 aa16.32■□□□□ 0.2
LINC00484-204ENST00000439438 ADRA2BP18089 450 aa16.26■□□□□ 0.19
LINC00484-204ENST00000439438 POTEDQ86YR6 584 aa16.21■□□□□ 0.19
LINC00484-204ENST00000439438 SCAF1Q9H7N4 1312 aaKnown RBP15.16■□□□□ 0.02
LINC00484-204ENST00000439438 DMRT2Q9Y5R5 561 aa15.05■□□□□ -0
LINC00484-204ENST00000439438 MAPK8IP2Q13387 824 aaPredicted RBP14.92□□□□□ -0.02
LINC00484-204ENST00000439438 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
LINC00484-204ENST00000439438 HOXD11P31277 338 aaPredicted RBP14.5□□□□□ -0.09
LINC00484-204ENST00000439438 CNKSR2Q8WXI2 1034 aa14.49□□□□□ -0.09
LINC00484-204ENST00000439438 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
LINC00484-204ENST00000439438 DCAF8L1A6NGE4 600 aa14.27□□□□□ -0.13
LINC00484-204ENST00000439438 CACNB1Q02641 598 aaPredicted RBP14.21□□□□□ -0.13
LINC00484-204ENST00000439438 DNAJC5BQ9UF47 199 aa14.21□□□□□ -0.13
LINC00484-204ENST00000439438 NCBP3Q53F19 620 aaKnown RBP14.2□□□□□ -0.14
LINC00484-204ENST00000439438 RNF39Q9H2S5 420 aa14.13□□□□□ -0.15
LINC00484-204ENST00000439438 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.17
LINC00484-204ENST00000439438 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
LINC00484-204ENST00000439438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC00484-204ENST00000439438 KCNA4P22459 653 aa13.45□□□□□ -0.26
LINC00484-204ENST00000439438 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
LINC00484-204ENST00000439438 APLP2Q06481 763 aa13.29□□□□□ -0.28
LINC00484-204ENST00000439438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.23□□□□□ -0.29
LINC00484-204ENST00000439438 HNRNPUL2Q1KMD3 747 aaKnown RBP13.23□□□□□ -0.29
LINC00484-204ENST00000439438 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
LINC00484-204ENST00000439438 CAPN15O75808 1086 aa13.2□□□□□ -0.3
LINC00484-204ENST00000439438 DSG3P32926 999 aa13.19□□□□□ -0.3
LINC00484-204ENST00000439438 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
LINC00484-204ENST00000439438 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
LINC00484-204ENST00000439438 ZNF219Q9P2Y4 722 aaPredicted RBP13.09□□□□□ -0.31
LINC00484-204ENST00000439438 TRHP20396 242 aaPredicted RBP12.94□□□□□ -0.34
LINC00484-204ENST00000439438 MYCNP04198 464 aaPredicted RBP12.91□□□□□ -0.34
LINC00484-204ENST00000439438 ABCB7O75027 752 aa12.8□□□□□ -0.36
LINC00484-204ENST00000439438 SLC4A1APQ9BWU0 796 aaKnown RBP12.76□□□□□ -0.37
LINC00484-204ENST00000439438 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
LINC00484-204ENST00000439438 POTEHQ6S545 545 aa12.72□□□□□ -0.37
LINC00484-204ENST00000439438 FOXD4L1Q9NU39 408 aa12.71□□□□□ -0.37
LINC00484-204ENST00000439438 POLA2Q14181 598 aa12.62□□□□□ -0.39
LINC00484-204ENST00000439438 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
LINC00484-204ENST00000439438 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
LINC00484-204ENST00000439438 ATF5Q9Y2D1 282 aaPredicted RBP12.4□□□□□ -0.42
LINC00484-204ENST00000439438 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
LINC00484-204ENST00000439438 CHRDL2Q6WN34 429 aa12.34□□□□□ -0.43
LINC00484-204ENST00000439438 ZBTB22O15209 634 aa12.31□□□□□ -0.44
LINC00484-204ENST00000439438 OSCARQ8IYS5 282 aa12.18□□□□□ -0.46
LINC00484-204ENST00000439438 REM2Q8IYK8 340 aaPredicted RBP12.16□□□□□ -0.46
LINC00484-204ENST00000439438 FBLN2P98095 1184 aa12.14□□□□□ -0.47
LINC00484-204ENST00000439438 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
LINC00484-204ENST00000439438 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
LINC00484-204ENST00000439438 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
LINC00484-204ENST00000439438 PITPNM1O00562 1244 aa12□□□□□ -0.49
LINC00484-204ENST00000439438 PIP4P2Q8N4L2 257 aa12□□□□□ -0.49
LINC00484-204ENST00000439438 FXR2P51116 673 aaKnown RBP eCLIP11.99□□□□□ -0.49
LINC00484-204ENST00000439438 SP7Q8TDD2 431 aaPredicted RBP11.93□□□□□ -0.5
LINC00484-204ENST00000439438 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
LINC00484-204ENST00000439438 SSUH2Q9Y2M2 353 aa11.89□□□□□ -0.51
LINC00484-204ENST00000439438 MKRN4PQ13434 485 aaPredicted RBP11.88□□□□□ -0.51
LINC00484-204ENST00000439438 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
LINC00484-204ENST00000439438 HAX1O00165 279 aa11.8□□□□□ -0.52
LINC00484-204ENST00000439438 CSRNP3Q8WYN3 585 aa11.76□□□□□ -0.53
LINC00484-204ENST00000439438 CLEC11AQ9Y240 323 aa11.73□□□□□ -0.53
LINC00484-204ENST00000439438 PRKAR2AP13861 404 aaKnown RBP11.71□□□□□ -0.53
LINC00484-204ENST00000439438 PABPN1Q86U42 306 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00484-204ENST00000439438 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
LINC00484-204ENST00000439438 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
LINC00484-204ENST00000439438 EVX2Q03828 476 aa11.53□□□□□ -0.56
LINC00484-204ENST00000439438 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
LINC00484-204ENST00000439438 CLCN6P51797 869 aa11.49□□□□□ -0.57
LINC00484-204ENST00000439438 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
LINC00484-204ENST00000439438 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
LINC00484-204ENST00000439438 FARP1Q9Y4F1 1045 aaPredicted RBP11.41□□□□□ -0.58
LINC00484-204ENST00000439438 GABBR2O75899 941 aa11.39□□□□□ -0.59
LINC00484-204ENST00000439438 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
LINC00484-204ENST00000439438 CD44P16070 742 aaKnown RBP11.34□□□□□ -0.59
LINC00484-204ENST00000439438 CREBZFQ9NS37 354 aa11.26□□□□□ -0.61
LINC00484-204ENST00000439438 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
LINC00484-204ENST00000439438 NPM1P06748 294 aaKnown RBP eCLIP11.19□□□□□ -0.62
LINC00484-204ENST00000439438 PAK3O75914 559 aaPredicted RBP11.17□□□□□ -0.62
LINC00484-204ENST00000439438 LHX8Q68G74 356 aa11.16□□□□□ -0.62
LINC00484-204ENST00000439438 PROM2Q8N271 834 aa11.16□□□□□ -0.62
LINC00484-204ENST00000439438 ZRANB1Q9UGI0 708 aa11.16□□□□□ -0.62
LINC00484-204ENST00000439438 DCBLD2Q96PD2 775 aa11.11□□□□□ -0.63
LINC00484-204ENST00000439438 POTEIP0CG38 1075 aa11.08□□□□□ -0.64
LINC00484-204ENST00000439438 MNX1P50219 401 aaPredicted RBP11.07□□□□□ -0.64
LINC00484-204ENST00000439438 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
LINC00484-204ENST00000439438 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
LINC00484-204ENST00000439438 PHF12Q96QT6 1004 aa10.92□□□□□ -0.66
LINC00484-204ENST00000439438 ASTLQ6HA08 431 aaPredicted RBP10.85□□□□□ -0.67
LINC00484-204ENST00000439438 ZBTB47Q9UFB7 747 aaPredicted RBP10.85□□□□□ -0.67
LINC00484-204ENST00000439438 MIER1Q8N108 512 aa10.84□□□□□ -0.67
LINC00484-204ENST00000439438 CCDC61Q9Y6R9 512 aa10.84□□□□□ -0.67
LINC00484-204ENST00000439438 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
LINC00484-204ENST00000439438 C7P10643 843 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms