RNA–Protein interactions for RNA: ENST00000567053.1

AC055876.1-202, humanhuman

BASIC

Gene AC055876.1, Length 138 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.1-202ENST00000567053 AEBP2Q6ZN18 517 aaPredicted RBP20.32■□□□□ 0.84
AC055876.1-202ENST00000567053 CHIC1Q5VXU3 224 aa19.55■□□□□ 0.72
AC055876.1-202ENST00000567053 PHF23Q9BUL5 403 aaPredicted RBP17.22■□□□□ 0.35
AC055876.1-202ENST00000567053 SENP3Q9H4L4 574 aaPredicted RBP17.2■□□□□ 0.34
AC055876.1-202ENST00000567053 FOXD1Q16676 465 aa16.06■□□□□ 0.16
AC055876.1-202ENST00000567053 PLPPR3Q6T4P5 718 aa15.75■□□□□ 0.11
AC055876.1-202ENST00000567053 PPP6R1Q9UPN7 881 aa15.3■□□□□ 0.04
AC055876.1-202ENST00000567053 ADRA2BP18089 450 aa15.28■□□□□ 0.04
AC055876.1-202ENST00000567053 PIAS4Q8N2W9 510 aaPredicted RBP15.08■□□□□ 0
AC055876.1-202ENST00000567053 MSH5O43196 834 aa14.82□□□□□ -0.04
AC055876.1-202ENST00000567053 POTEDQ86YR6 584 aa14□□□□□ -0.17
AC055876.1-202ENST00000567053 MAPK8IP2Q13387 824 aaPredicted RBP13.96□□□□□ -0.17
AC055876.1-202ENST00000567053 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
AC055876.1-202ENST00000567053 SCAF1Q9H7N4 1312 aaKnown RBP13.86□□□□□ -0.19
AC055876.1-202ENST00000567053 DMRT2Q9Y5R5 561 aa13.7□□□□□ -0.22
AC055876.1-202ENST00000567053 CNKSR2Q8WXI2 1034 aa13.51□□□□□ -0.25
AC055876.1-202ENST00000567053 NCBP3Q53F19 620 aaKnown RBP13.4□□□□□ -0.26
AC055876.1-202ENST00000567053 KCNA4P22459 653 aa13.33□□□□□ -0.28
AC055876.1-202ENST00000567053 HOXD11P31277 338 aaPredicted RBP13.3□□□□□ -0.28
AC055876.1-202ENST00000567053 RNF216Q9NWF9 866 aaPredicted RBP13.29□□□□□ -0.28
AC055876.1-202ENST00000567053 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.29
AC055876.1-202ENST00000567053 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
AC055876.1-202ENST00000567053 DNAJC5BQ9UF47 199 aa12.76□□□□□ -0.37
AC055876.1-202ENST00000567053 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.74□□□□□ -0.37
AC055876.1-202ENST00000567053 RNF39Q9H2S5 420 aa12.71□□□□□ -0.37
AC055876.1-202ENST00000567053 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
AC055876.1-202ENST00000567053 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
AC055876.1-202ENST00000567053 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
AC055876.1-202ENST00000567053 C1QBPQ07021 282 aaKnown RBP12.51□□□□□ -0.41
AC055876.1-202ENST00000567053 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
AC055876.1-202ENST00000567053 ZBTB22O15209 634 aa12.29□□□□□ -0.44
AC055876.1-202ENST00000567053 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
AC055876.1-202ENST00000567053 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
AC055876.1-202ENST00000567053 MYCNP04198 464 aaPredicted RBP12.22□□□□□ -0.45
AC055876.1-202ENST00000567053 CAPN15O75808 1086 aa12.21□□□□□ -0.45
AC055876.1-202ENST00000567053 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.16□□□□□ -0.46
AC055876.1-202ENST00000567053 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
AC055876.1-202ENST00000567053 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
AC055876.1-202ENST00000567053 TRHP20396 242 aaPredicted RBP12.11□□□□□ -0.47
AC055876.1-202ENST00000567053 APLP2Q06481 763 aa12.08□□□□□ -0.48
AC055876.1-202ENST00000567053 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
AC055876.1-202ENST00000567053 DSG3P32926 999 aa12.03□□□□□ -0.48
AC055876.1-202ENST00000567053 ABCB7O75027 752 aa12.01□□□□□ -0.49
AC055876.1-202ENST00000567053 ATF5Q9Y2D1 282 aaPredicted RBP12.01□□□□□ -0.49
AC055876.1-202ENST00000567053 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
AC055876.1-202ENST00000567053 CSRNP3Q8WYN3 585 aa11.98□□□□□ -0.49
AC055876.1-202ENST00000567053 POLA2Q14181 598 aa11.84□□□□□ -0.51
AC055876.1-202ENST00000567053 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
AC055876.1-202ENST00000567053 ZBTB12Q9Y330 459 aaPredicted RBP11.52□□□□□ -0.57
AC055876.1-202ENST00000567053 OSCARQ8IYS5 282 aa11.47□□□□□ -0.57
AC055876.1-202ENST00000567053 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
AC055876.1-202ENST00000567053 FBLN2P98095 1184 aa11.43□□□□□ -0.58
AC055876.1-202ENST00000567053 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
AC055876.1-202ENST00000567053 SPDYE2BA6NHP3 402 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 SPDYE6P0CI01 402 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 AKT1S1Q96B36 256 aa11.23□□□□□ -0.61
AC055876.1-202ENST00000567053 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
AC055876.1-202ENST00000567053 REM2Q8IYK8 340 aaPredicted RBP11.18□□□□□ -0.62
AC055876.1-202ENST00000567053 SSUH2Q9Y2M2 353 aa11.12□□□□□ -0.63
AC055876.1-202ENST00000567053 CHRDL2Q6WN34 429 aa11.09□□□□□ -0.63
AC055876.1-202ENST00000567053 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
AC055876.1-202ENST00000567053 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
AC055876.1-202ENST00000567053 PABPN1Q86U42 306 aaKnown RBP eCLIP11.05□□□□□ -0.64
AC055876.1-202ENST00000567053 POTEHQ6S545 545 aa11.02□□□□□ -0.65
AC055876.1-202ENST00000567053 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
AC055876.1-202ENST00000567053 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
AC055876.1-202ENST00000567053 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
AC055876.1-202ENST00000567053 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
AC055876.1-202ENST00000567053 FKBP8Q14318 412 aa10.86□□□□□ -0.67
AC055876.1-202ENST00000567053 PRR29P0C7W0 189 aa10.82□□□□□ -0.68
AC055876.1-202ENST00000567053 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
AC055876.1-202ENST00000567053 CHADLQ6NUI6 762 aa10.78□□□□□ -0.68
AC055876.1-202ENST00000567053 PROM2Q8N271 834 aa10.77□□□□□ -0.69
AC055876.1-202ENST00000567053 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
AC055876.1-202ENST00000567053 HAX1O00165 279 aa10.64□□□□□ -0.71
AC055876.1-202ENST00000567053 CREBZFQ9NS37 354 aa10.64□□□□□ -0.71
AC055876.1-202ENST00000567053 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
AC055876.1-202ENST00000567053 EVX2Q03828 476 aa10.57□□□□□ -0.72
AC055876.1-202ENST00000567053 MIER1Q8N108 512 aa10.52□□□□□ -0.73
AC055876.1-202ENST00000567053 C19orf67A6NJJ6 358 aa10.51□□□□□ -0.73
AC055876.1-202ENST00000567053 MNX1P50219 401 aaPredicted RBP10.49□□□□□ -0.73
AC055876.1-202ENST00000567053 PLCD3Q8N3E9 789 aa10.48□□□□□ -0.73
AC055876.1-202ENST00000567053 SP7Q8TDD2 431 aaPredicted RBP10.47□□□□□ -0.73
AC055876.1-202ENST00000567053 CD44P16070 742 aaKnown RBP10.46□□□□□ -0.73
AC055876.1-202ENST00000567053 FBXO3Q9UK99 471 aa10.45□□□□□ -0.74
AC055876.1-202ENST00000567053 PLEKHG5O94827 1062 aa10.41□□□□□ -0.74
AC055876.1-202ENST00000567053 NPM1P06748 294 aaKnown RBP eCLIP10.4□□□□□ -0.74
AC055876.1-202ENST00000567053 VASPP50552 380 aaPredicted RBP10.37□□□□□ -0.75
AC055876.1-202ENST00000567053 ZRANB1Q9UGI0 708 aa10.37□□□□□ -0.75
AC055876.1-202ENST00000567053 TSPYL2Q9H2G4 693 aaPredicted RBP10.32□□□□□ -0.76
AC055876.1-202ENST00000567053 GABBR2O75899 941 aa10.3□□□□□ -0.76
AC055876.1-202ENST00000567053 PAK3O75914 559 aaPredicted RBP10.3□□□□□ -0.76
AC055876.1-202ENST00000567053 RASEFQ8IZ41 740 aa10.3□□□□□ -0.76
AC055876.1-202ENST00000567053 PHF12Q96QT6 1004 aa10.29□□□□□ -0.76
AC055876.1-202ENST00000567053 KLHL34Q8N239 644 aa10.28□□□□□ -0.76
AC055876.1-202ENST00000567053 ZBTB47Q9UFB7 747 aaPredicted RBP10.28□□□□□ -0.76
AC055876.1-202ENST00000567053 ZNF579Q8NAF0 562 aaKnown RBP10.27□□□□□ -0.77
AC055876.1-202ENST00000567053 NUBP1P53384 320 aa10.25□□□□□ -0.77
AC055876.1-202ENST00000567053 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms