Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 OPHN1-201ENST00000355520 7879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 FHL2-207ENST00000409177 4881 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 NSD2-207ENST00000398261 8390 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 GRIA1-202ENST00000340592 3170 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 APOL4-212ENST00000616056 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 DNAH10-209ENST00000614082 3484 ntTSL 5 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 PARP11-204ENST00000447133 4377 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 ADAMTS12-201ENST00000352040 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 CLUAP1-212ENST00000576634 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 EPHB2-204ENST00000400191 10816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 ZEB2-245ENST00000638087 9339 ntTSL 5 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU1-120P-201ENST00000363009 157 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SNORD14E-201ENST00000364009 85 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-268P-201ENST00000364174 107 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SNORA5C-201ENST00000364902 137 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 WTAPP1-201ENST00000371455 546 ntTSL 4 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-629P-201ENST00000384061 103 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 Y_RNA.470-201ENST00000384307 117 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-748P-201ENST00000384648 107 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNA5SP29-201ENST00000410988 106 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC074348.1-201ENST00000426503 132 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 HBBP1-201ENST00000433329 439 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU7-96P-201ENST00000459535 64 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RN7SL120P-201ENST00000463924 296 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC097484.1-201ENST00000471148 389 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 IGKV1-12-201ENST00000480492 398 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC097263.1-201ENST00000496795 606 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC108073.1-201ENST00000508231 674 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RNU6-1258P-201ENST00000516911 111 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 IGKV2-18-201ENST00000522607 343 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC093249.3-201ENST00000562444 424 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC106785.4-201ENST00000569492 412 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 MIR4419A-201ENST00000583845 77 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC020891.4-201ENST00000605745 93 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AP000457.1-201ENST00000620221 378 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC141557.2-201ENST00000621330 482 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 USP15-202ENST00000312635 2226 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 C4BPA-201ENST00000367070 2243 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SIPA1L1-203ENST00000537413 4129 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 CRNKL1-201ENST00000377327 4370 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AC092881.1-201ENST00000638218 2733 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RAB3GAP1-201ENST00000264158 4914 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 ITIH3-202ENST00000449956 3007 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AL133243.3-201ENST00000617415 3004 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 FANCM-202ENST00000542564 6167 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF347-207ENST00000601469 2812 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 MFSD8-236ENST00000641509 4050 ntBASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 TRIM55-204ENST00000353317 2624 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 HIVEP3-201ENST00000372583 12193 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SYK-202ENST00000375747 4908 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC4.39□□□□□ -1.71
KRTAP3-3Q9BYR6 VWA3B-213ENST00000477737 4454 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 USP17L15-202ENST00000621432 1680 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 PLEC-207ENST00000398774 14646 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF512-208ENST00000556601 3543 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 FBXL17-206ENST00000619412 4059 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 SEC24A-202ENST00000398844 6299 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 CNTNAP4-202ENST00000377504 4723 ntTSL 5 BASIC4.38□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms