RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 AEBP2Q6ZN18 517 aaPredicted RBP9.83□□□□□ -0.84
RNU6-1258P-201ENST00000516911 CHIC1Q5VXU3 224 aa9.37□□□□□ -0.91
RNU6-1258P-201ENST00000516911 SENP3Q9H4L4 574 aaPredicted RBP8.55□□□□□ -1.04
RNU6-1258P-201ENST00000516911 PHF23Q9BUL5 403 aaPredicted RBP8.39□□□□□ -1.07
RNU6-1258P-201ENST00000516911 FOXD1Q16676 465 aa7.91□□□□□ -1.14
RNU6-1258P-201ENST00000516911 MSH5O43196 834 aa7.55□□□□□ -1.2
RNU6-1258P-201ENST00000516911 POTEDQ86YR6 584 aa7.52□□□□□ -1.21
RNU6-1258P-201ENST00000516911 PIAS4Q8N2W9 510 aaPredicted RBP7.44□□□□□ -1.22
RNU6-1258P-201ENST00000516911 PLPPR3Q6T4P5 718 aa7.43□□□□□ -1.22
RNU6-1258P-201ENST00000516911 ADRA2BP18089 450 aa7.27□□□□□ -1.25
RNU6-1258P-201ENST00000516911 PPP6R1Q9UPN7 881 aa7.25□□□□□ -1.25
RNU6-1258P-201ENST00000516911 SCAF1Q9H7N4 1312 aaKnown RBP6.81□□□□□ -1.32
RNU6-1258P-201ENST00000516911 DMRT2Q9Y5R5 561 aa6.71□□□□□ -1.34
RNU6-1258P-201ENST00000516911 MAPK8IP2Q13387 824 aaPredicted RBP6.7□□□□□ -1.34
RNU6-1258P-201ENST00000516911 CACNB1Q02641 598 aaPredicted RBP6.6□□□□□ -1.35
RNU6-1258P-201ENST00000516911 DCAF8L1A6NGE4 600 aa6.59□□□□□ -1.35
RNU6-1258P-201ENST00000516911 PPP4R3CPQ6ZMV5 832 aa6.47□□□□□ -1.37
RNU6-1258P-201ENST00000516911 HOXD11P31277 338 aaPredicted RBP6.39□□□□□ -1.39
RNU6-1258P-201ENST00000516911 CNKSR2Q8WXI2 1034 aa6.39□□□□□ -1.39
RNU6-1258P-201ENST00000516911 RNF39Q9H2S5 420 aa6.35□□□□□ -1.39
RNU6-1258P-201ENST00000516911 RNF216Q9NWF9 866 aaPredicted RBP6.35□□□□□ -1.39
RNU6-1258P-201ENST00000516911 C1QBPQ07021 282 aaKnown RBP6.32□□□□□ -1.4
RNU6-1258P-201ENST00000516911 NCBP3Q53F19 620 aaKnown RBP6.27□□□□□ -1.41
RNU6-1258P-201ENST00000516911 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.22□□□□□ -1.41
RNU6-1258P-201ENST00000516911 DNAJC5BQ9UF47 199 aa6.21□□□□□ -1.42
RNU6-1258P-201ENST00000516911 NPM3O75607 178 aaKnown RBP6.04□□□□□ -1.44
RNU6-1258P-201ENST00000516911 CAPN15O75808 1086 aa6.02□□□□□ -1.45
RNU6-1258P-201ENST00000516911 APLP2Q06481 763 aa5.95□□□□□ -1.46
RNU6-1258P-201ENST00000516911 U3KPZ7 1027 aaPredicted RBP5.94□□□□□ -1.46
RNU6-1258P-201ENST00000516911 DSG3P32926 999 aa5.91□□□□□ -1.46
RNU6-1258P-201ENST00000516911 SPINK5Q9NQ38 1064 aaPredicted RBP5.91□□□□□ -1.46
RNU6-1258P-201ENST00000516911 POTEHQ6S545 545 aa5.9□□□□□ -1.46
RNU6-1258P-201ENST00000516911 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.88□□□□□ -1.47
RNU6-1258P-201ENST00000516911 TRHP20396 242 aaPredicted RBP5.88□□□□□ -1.47
RNU6-1258P-201ENST00000516911 HNRNPUL2Q1KMD3 747 aaKnown RBP5.88□□□□□ -1.47
RNU6-1258P-201ENST00000516911 ZNF219Q9P2Y4 722 aaPredicted RBP5.85□□□□□ -1.47
RNU6-1258P-201ENST00000516911 ABCB7O75027 752 aa5.81□□□□□ -1.48
RNU6-1258P-201ENST00000516911 KCNA4P22459 653 aa5.8□□□□□ -1.48
RNU6-1258P-201ENST00000516911 SAMD1Q6SPF0 538 aaPredicted RBP5.8□□□□□ -1.48
RNU6-1258P-201ENST00000516911 SLC4A2P04920 1241 aa5.76□□□□□ -1.49
RNU6-1258P-201ENST00000516911 RBM42Q9BTD8 480 aaKnown RBP5.75□□□□□ -1.49
RNU6-1258P-201ENST00000516911 MYCNP04198 464 aaPredicted RBP5.66□□□□□ -1.5
RNU6-1258P-201ENST00000516911 POLA2Q14181 598 aa5.66□□□□□ -1.5
RNU6-1258P-201ENST00000516911 CHRDL2Q6WN34 429 aa5.62□□□□□ -1.51
RNU6-1258P-201ENST00000516911 ZBTB12Q9Y330 459 aaPredicted RBP5.59□□□□□ -1.51
RNU6-1258P-201ENST00000516911 AKT1S1Q96B36 256 aa5.54□□□□□ -1.52
RNU6-1258P-201ENST00000516911 SLC4A1APQ9BWU0 796 aaKnown RBP5.52□□□□□ -1.53
RNU6-1258P-201ENST00000516911 FOXD4L1Q9NU39 408 aa5.51□□□□□ -1.53
RNU6-1258P-201ENST00000516911 SP7Q8TDD2 431 aaPredicted RBP5.48□□□□□ -1.53
RNU6-1258P-201ENST00000516911 HAX1O00165 279 aa5.47□□□□□ -1.53
RNU6-1258P-201ENST00000516911 REM2Q8IYK8 340 aaPredicted RBP5.46□□□□□ -1.54
RNU6-1258P-201ENST00000516911 OSCARQ8IYS5 282 aa5.44□□□□□ -1.54
RNU6-1258P-201ENST00000516911 ATF5Q9Y2D1 282 aaPredicted RBP5.43□□□□□ -1.54
RNU6-1258P-201ENST00000516911 PIP4P2Q8N4L2 257 aa5.42□□□□□ -1.54
RNU6-1258P-201ENST00000516911 FBLN2P98095 1184 aa5.41□□□□□ -1.54
RNU6-1258P-201ENST00000516911 PITPNM1O00562 1244 aa5.38□□□□□ -1.55
RNU6-1258P-201ENST00000516911 SPDYE2BA6NHP3 402 aa5.36□□□□□ -1.55
RNU6-1258P-201ENST00000516911 SPDYE6P0CI01 402 aa5.36□□□□□ -1.55
RNU6-1258P-201ENST00000516911 FXR2P51116 673 aaKnown RBP eCLIP5.36□□□□□ -1.55
RNU6-1258P-201ENST00000516911 SPDYE2Q495Y8 402 aa5.36□□□□□ -1.55
RNU6-1258P-201ENST00000516911 CLEC11AQ9Y240 323 aa5.36□□□□□ -1.55
RNU6-1258P-201ENST00000516911 ATXN8OSP0DMR3 200 aa5.35□□□□□ -1.55
RNU6-1258P-201ENST00000516911 SPDYE1Q8NFV5 336 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1258P-201ENST00000516911 PRKAR2AP13861 404 aaKnown RBP5.3□□□□□ -1.56
RNU6-1258P-201ENST00000516911 ZNF692Q9BU19 519 aaPredicted RBP5.3□□□□□ -1.56
RNU6-1258P-201ENST00000516911 ZBTB22O15209 634 aa5.25□□□□□ -1.57
RNU6-1258P-201ENST00000516911 PRR29P0C7W0 189 aa5.24□□□□□ -1.57
RNU6-1258P-201ENST00000516911 EVX2Q03828 476 aa5.23□□□□□ -1.57
RNU6-1258P-201ENST00000516911 C19orf67A6NJJ6 358 aa5.19□□□□□ -1.58
RNU6-1258P-201ENST00000516911 PABPN1Q86U42 306 aaKnown RBP eCLIP5.19□□□□□ -1.58
RNU6-1258P-201ENST00000516911 SSUH2Q9Y2M2 353 aa5.19□□□□□ -1.58
RNU6-1258P-201ENST00000516911 GABBR2O75899 941 aa5.18□□□□□ -1.58
RNU6-1258P-201ENST00000516911 CHADLQ6NUI6 762 aa5.18□□□□□ -1.58
RNU6-1258P-201ENST00000516911 MKRN4PQ13434 485 aaPredicted RBP5.17□□□□□ -1.58
RNU6-1258P-201ENST00000516911 LHX8Q68G74 356 aa5.16□□□□□ -1.58
RNU6-1258P-201ENST00000516911 CLCN6P51797 869 aa5.14□□□□□ -1.59
RNU6-1258P-201ENST00000516911 CD44P16070 742 aaKnown RBP5.13□□□□□ -1.59
RNU6-1258P-201ENST00000516911 DCBLD2Q96PD2 775 aa5.12□□□□□ -1.59
RNU6-1258P-201ENST00000516911 FARP1Q9Y4F1 1045 aaPredicted RBP5.1□□□□□ -1.59
RNU6-1258P-201ENST00000516911 STAG3Q9UJ98 1225 aa5.09□□□□□ -1.59
RNU6-1258P-201ENST00000516911 PAK3O75914 559 aaPredicted RBP5.07□□□□□ -1.6
RNU6-1258P-201ENST00000516911 ZRANB1Q9UGI0 708 aa5.05□□□□□ -1.6
RNU6-1258P-201ENST00000516911 PLSCR2Q9NRY7 297 aa5.02□□□□□ -1.61
RNU6-1258P-201ENST00000516911 NPM1P06748 294 aaKnown RBP eCLIP5.01□□□□□ -1.61
RNU6-1258P-201ENST00000516911 ZNF579Q8NAF0 562 aaKnown RBP4.99□□□□□ -1.61
RNU6-1258P-201ENST00000516911 POTEIP0CG38 1075 aa4.98□□□□□ -1.61
RNU6-1258P-201ENST00000516911 SPDYE4A6NLX3 237 aa4.97□□□□□ -1.61
RNU6-1258P-201ENST00000516911 CREBZFQ9NS37 354 aa4.96□□□□□ -1.62
RNU6-1258P-201ENST00000516911 CSRNP3Q8WYN3 585 aa4.95□□□□□ -1.62
RNU6-1258P-201ENST00000516911 GALR2O43603 387 aaPredicted RBP4.93□□□□□ -1.62
RNU6-1258P-201ENST00000516911 PLEKHG5O94827 1062 aa4.92□□□□□ -1.62
RNU6-1258P-201ENST00000516911 PHF12Q96QT6 1004 aa4.91□□□□□ -1.62
RNU6-1258P-201ENST00000516911 MAMSTRQ6ZN01 415 aa4.89□□□□□ -1.63
RNU6-1258P-201ENST00000516911 EHMT2Q96KQ7 1210 aa4.89□□□□□ -1.63
RNU6-1258P-201ENST00000516911 SLC39A7Q92504 469 aa4.88□□□□□ -1.63
RNU6-1258P-201ENST00000516911 TSPYL2Q9H2G4 693 aaPredicted RBP4.88□□□□□ -1.63
RNU6-1258P-201ENST00000516911 C7P10643 843 aa4.87□□□□□ -1.63
RNU6-1258P-201ENST00000516911 OTUD5Q96G74 571 aa4.87□□□□□ -1.63
RNU6-1258P-201ENST00000516911 POTEMA6NI47 508 aa4.86□□□□□ -1.63
RNU6-1258P-201ENST00000516911 SCUBE2Q9NQ36 999 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms