RNA–Protein interactions for RNA: ENST00000489514.6

HHLA2-209, Transcript of HERV-H LTR-associating 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HHLA2, Length 2,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA2-209ENST00000489514 NISCHQ9Y2I1 1504 aa11.2□□□□□ -0.62
HHLA2-209ENST00000489514 AEBP2Q6ZN18 517 aaPredicted RBP9.96□□□□□ -0.82
HHLA2-209ENST00000489514 SHROOM4Q9ULL8 1493 aa9.78□□□□□ -0.84
HHLA2-209ENST00000489514 SUPT5HO00267 1087 aaKnown RBP9.76□□□□□ -0.85
HHLA2-209ENST00000489514 HRCP23327 699 aa9.73□□□□□ -0.85
HHLA2-209ENST00000489514 CHIC1Q5VXU3 224 aa9.59□□□□□ -0.87
HHLA2-209ENST00000489514 PCGF6Q9BYE7 350 aa9.57□□□□□ -0.88
HHLA2-209ENST00000489514 MYO15BQ96JP2 1530 aa9.54□□□□□ -0.88
HHLA2-209ENST00000489514 ZCCHC6Q5VYS8 1495 aaKnown RBP9.5□□□□□ -0.89
HHLA2-209ENST00000489514 PPARGC1BQ86YN6 1023 aaKnown RBP9.47□□□□□ -0.89
HHLA2-209ENST00000489514 PELP1Q8IZL8 1130 aaKnown RBP9.47□□□□□ -0.89
HHLA2-209ENST00000489514 DCAF1Q9Y4B6 1507 aa9.38□□□□□ -0.91
HHLA2-209ENST00000489514 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
HHLA2-209ENST00000489514 DCAF8L2P0C7V8 631 aa9.35□□□□□ -0.91
HHLA2-209ENST00000489514 CCDC180Q9P1Z9 1646 aa9.35□□□□□ -0.91
HHLA2-209ENST00000489514 LOC105371045A0A1W2PR82 267 aa9.34□□□□□ -0.91
HHLA2-209ENST00000489514 TRIM26Q12899 539 aaPredicted RBP9.33□□□□□ -0.92
HHLA2-209ENST00000489514 ZEB1P37275 1124 aaPredicted RBP9.25□□□□□ -0.93
HHLA2-209ENST00000489514 MYT1Q01538 1121 aa9.18□□□□□ -0.94
HHLA2-209ENST00000489514 SCAF1Q9H7N4 1312 aaKnown RBP9.11□□□□□ -0.95
HHLA2-209ENST00000489514 TRIM41Q8WV44 630 aa9.07□□□□□ -0.96
HHLA2-209ENST00000489514 FAM9AQ8IZU1 332 aaPredicted RBP9.01□□□□□ -0.97
HHLA2-209ENST00000489514 RSF1Q96T23 1441 aaPredicted RBP8.99□□□□□ -0.97
HHLA2-209ENST00000489514 ABCC9O60706 1549 aa8.99□□□□□ -0.97
HHLA2-209ENST00000489514 ACIN1Q9UKV3 1341 aaKnown RBP8.96□□□□□ -0.98
HHLA2-209ENST00000489514 EHMT2Q96KQ7 1210 aa8.93□□□□□ -0.98
HHLA2-209ENST00000489514 NEUROD1Q13562 356 aa8.91□□□□□ -0.98
HHLA2-209ENST00000489514 CCER1Q8TC90 406 aaPredicted RBP8.91□□□□□ -0.98
HHLA2-209ENST00000489514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.9□□□□□ -0.98
HHLA2-209ENST00000489514 RB1CC1Q8TDY2 1594 aa8.9□□□□□ -0.99
HHLA2-209ENST00000489514 CENPBP07199 599 aaPredicted RBP8.89□□□□□ -0.99
HHLA2-209ENST00000489514 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
HHLA2-209ENST00000489514 GTF3C3Q9Y5Q9 886 aa8.87□□□□□ -0.99
HHLA2-209ENST00000489514 SCRIBQ14160 1630 aa8.84□□□□□ -0.99
HHLA2-209ENST00000489514 CECR2Q9BXF3 1484 aa8.74□□□□□ -1.01
HHLA2-209ENST00000489514 ZNF316A6NFI3 1004 aaPredicted RBP8.74□□□□□ -1.01
HHLA2-209ENST00000489514 MROH2BQ7Z745 1585 aa8.72□□□□□ -1.01
HHLA2-209ENST00000489514 WRNQ14191 1432 aaPredicted RBP eCLIP8.71□□□□□ -1.01
HHLA2-209ENST00000489514 TTBK1Q5TCY1 1321 aaPredicted RBP8.7□□□□□ -1.02
HHLA2-209ENST00000489514 WIZO95785 1651 aa8.68□□□□□ -1.02
HHLA2-209ENST00000489514 YTHDC1Q96MU7 727 aaKnown RBP8.67□□□□□ -1.02
HHLA2-209ENST00000489514 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
HHLA2-209ENST00000489514 TNIKQ9UKE5 1360 aa8.64□□□□□ -1.03
HHLA2-209ENST00000489514 MIER1Q8N108 512 aa8.64□□□□□ -1.03
HHLA2-209ENST00000489514 NACADO15069 1562 aa8.63□□□□□ -1.03
HHLA2-209ENST00000489514 BAZ1AQ9NRL2 1556 aaPredicted RBP8.62□□□□□ -1.03
HHLA2-209ENST00000489514 UBTFP17480 764 aaKnown RBP8.62□□□□□ -1.03
HHLA2-209ENST00000489514 EIF4G1Q04637 1599 aaKnown RBP8.61□□□□□ -1.03
HHLA2-209ENST00000489514 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
HHLA2-209ENST00000489514 CSRNP3Q8WYN3 585 aa8.61□□□□□ -1.03
HHLA2-209ENST00000489514 SOGA1O94964 1423 aa8.59□□□□□ -1.04
HHLA2-209ENST00000489514 ABCC8Q09428 1581 aa8.58□□□□□ -1.04
HHLA2-209ENST00000489514 PLPPR3Q6T4P5 718 aa8.58□□□□□ -1.04
HHLA2-209ENST00000489514 EEA1Q15075 1411 aa8.58□□□□□ -1.04
HHLA2-209ENST00000489514 HNRNPUL2Q1KMD3 747 aaKnown RBP8.56□□□□□ -1.04
HHLA2-209ENST00000489514 TOP2AP11388 1531 aaKnown RBP8.53□□□□□ -1.04
HHLA2-209ENST00000489514 RUSC2Q8N2Y8 1516 aa8.52□□□□□ -1.04
HHLA2-209ENST00000489514 GOLGA3Q08378 1498 aa8.52□□□□□ -1.05
HHLA2-209ENST00000489514 SENP3Q9H4L4 574 aaPredicted RBP8.51□□□□□ -1.05
HHLA2-209ENST00000489514 CLSPNQ9HAW4 1339 aa8.51□□□□□ -1.05
HHLA2-209ENST00000489514 APLP2Q06481 763 aa8.5□□□□□ -1.05
HHLA2-209ENST00000489514 SMARCA2P51531 1590 aa8.5□□□□□ -1.05
HHLA2-209ENST00000489514 BCL11AQ9H165 835 aa8.46□□□□□ -1.05
HHLA2-209ENST00000489514 RTN4Q9NQC3 1192 aaKnown RBP8.46□□□□□ -1.05
HHLA2-209ENST00000489514 SUPT16HQ9Y5B9 1047 aaKnown RBP8.46□□□□□ -1.05
HHLA2-209ENST00000489514 CLIP1P30622 1438 aa8.45□□□□□ -1.06
HHLA2-209ENST00000489514 SMARCA4P51532 1647 aa8.45□□□□□ -1.06
HHLA2-209ENST00000489514 CEP164Q9UPV0 1460 aa8.45□□□□□ -1.06
HHLA2-209ENST00000489514 VPS8Q8N3P4 1428 aa8.44□□□□□ -1.06
HHLA2-209ENST00000489514 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
HHLA2-209ENST00000489514 ANP32EQ9BTT0 268 aa8.42□□□□□ -1.06
HHLA2-209ENST00000489514 KIF21BO75037 1637 aa8.4□□□□□ -1.06
HHLA2-209ENST00000489514 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.07
HHLA2-209ENST00000489514 TSHZ2Q9NRE2 1034 aa8.4□□□□□ -1.07
HHLA2-209ENST00000489514 DHX57Q6P158 1386 aaKnown RBP8.39□□□□□ -1.07
HHLA2-209ENST00000489514 BAZ1BQ9UIG0 1483 aaKnown RBP8.38□□□□□ -1.07
HHLA2-209ENST00000489514 RANGAP1P46060 587 aaPredicted RBP8.38□□□□□ -1.07
HHLA2-209ENST00000489514 RAPGEF2Q9Y4G8 1499 aa8.35□□□□□ -1.07
HHLA2-209ENST00000489514 SYNJ1O43426 1573 aa8.34□□□□□ -1.07
HHLA2-209ENST00000489514 NCBP3Q53F19 620 aaKnown RBP8.34□□□□□ -1.07
HHLA2-209ENST00000489514 KANK4Q5T7N3 995 aaPredicted RBP8.31□□□□□ -1.08
HHLA2-209ENST00000489514 KCNH8Q96L42 1107 aa8.3□□□□□ -1.08
HHLA2-209ENST00000489514 PEG3Q9GZU2 1588 aa8.28□□□□□ -1.08
HHLA2-209ENST00000489514 FKBP8Q14318 412 aa8.28□□□□□ -1.08
HHLA2-209ENST00000489514 RRBP1Q9P2E9 1410 aaKnown RBP8.27□□□□□ -1.08
HHLA2-209ENST00000489514 UNC13AQ9UPW8 1703 aa8.27□□□□□ -1.08
HHLA2-209ENST00000489514 BCANQ96GW7 911 aa8.27□□□□□ -1.09
HHLA2-209ENST00000489514 PABPN1Q86U42 306 aaKnown RBP eCLIP8.26□□□□□ -1.09
HHLA2-209ENST00000489514 CUX2O14529 1486 aa8.26□□□□□ -1.09
HHLA2-209ENST00000489514 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
HHLA2-209ENST00000489514 ITGAEP38570 1179 aa8.25□□□□□ -1.09
HHLA2-209ENST00000489514 ARAP1Q96P48 1450 aa8.24□□□□□ -1.09
HHLA2-209ENST00000489514 NEFLP07196 543 aa8.24□□□□□ -1.09
HHLA2-209ENST00000489514 DDX10Q13206 875 aaKnown RBP8.24□□□□□ -1.09
HHLA2-209ENST00000489514 ERICH3Q5RHP9 1530 aa8.24□□□□□ -1.09
HHLA2-209ENST00000489514 PRXQ9BXM0 1461 aa8.24□□□□□ -1.09
HHLA2-209ENST00000489514 RBM19Q9Y4C8 960 aaKnown RBP8.23□□□□□ -1.09
HHLA2-209ENST00000489514 TOP2BQ02880 1626 aa8.22□□□□□ -1.09
HHLA2-209ENST00000489514 ATAD2BQ9ULI0 1458 aa8.21□□□□□ -1.09
HHLA2-209ENST00000489514 RAB3GAP2Q9H2M9 1393 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms