Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 KRT18P16-201ENST00000510337 1294 ntBASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 MTDHP1-201ENST00000605323 784 ntBASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DRB4X5D2U9 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 POU5F1P3-201ENST00000428824 1078 ntBASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 TUBB8P6-201ENST00000436895 1288 ntBASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 NME1-207ENST00000480143 964 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 KRT8P8-201ENST00000434750 1448 ntBASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DRB4X5D2U9 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.46□□□□□ -0.1
HLA-DRB4X5D2U9 AC090340.1-201ENST00000620778 4980 ntBASIC14.46□□□□□ -0.1
HLA-DRB4X5D2U9 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DRB4X5D2U9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DRB4X5D2U9 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
HLA-DRB4X5D2U9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 NBPF21P-201ENST00000425093 1451 ntBASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 AC079598.2-202ENST00000546624 1451 ntBASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 AC239809.2-201ENST00000415381 517 ntBASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 AC006058.3-201ENST00000606217 1069 ntBASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DRB4X5D2U9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms