Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 CYP2D8P-201ENST00000433633 1490 ntBASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 AC073912.3-201ENST00000624414 853 ntBASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 MMP23A-201ENST00000234610 1017 ntBASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 PRSS44-201ENST00000515154 1146 ntBASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 SLC25A1P4-201ENST00000567977 778 ntBASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 AC012306.2-201ENST00000609350 630 ntBASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CLDN16Q9Y5I7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CLDN16Q9Y5I7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 CRYGFP-201ENST00000418459 633 ntBASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 AC010947.1-201ENST00000623454 693 ntBASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.89■□□□□ 0.45
CLDN16Q9Y5I7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CLDN16Q9Y5I7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CLDN16Q9Y5I7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms