Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
AP4E1Q9UPM8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 RPS2P4-201ENST00000476944 856 ntBASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.95■□□□□ 0.78
AP4E1Q9UPM8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 AC018445.3-201ENST00000624177 1945 ntBASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 KSR1P1-201ENST00000446298 240 ntBASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 AF186192.3-201ENST00000583427 947 ntBASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
AP4E1Q9UPM8 AC087289.5-201ENST00000586076 3175 ntBASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 AL161938.1-201ENST00000569833 2180 ntBASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
AP4E1Q9UPM8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 AP000974.1-201ENST00000623909 2387 ntBASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 AC004980.1-204ENST00000429707 299 ntBASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 UBE2SP1-201ENST00000450587 669 ntBASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 Z85996.1-201ENST00000494644 937 ntBASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 AC131212.4-201ENST00000623606 975 ntBASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 TMEM191A-211ENST00000637163 1067 ntBASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
AP4E1Q9UPM8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms