Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NLRC4Q9NPP4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NLRC4Q9NPP4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NLRC4Q9NPP4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
NLRC4Q9NPP4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NLRC4Q9NPP4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 FP475955.4-201ENST00000623131 1990 ntBASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 HLA-L-209ENST00000420110 1011 ntBASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NLRC4Q9NPP4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 NEFHP1-201ENST00000412845 2629 ntBASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NLRC4Q9NPP4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
NLRC4Q9NPP4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms