Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
BRF2Q9HAW0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.39■□□□□ 0.54
BRF2Q9HAW0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 KRASP1-201ENST00000407852 552 ntBASIC18.39■□□□□ 0.53
BRF2Q9HAW0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY21P-201ENST00000433481 731 ntBASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 AC093503.3-201ENST00000624917 2352 ntBASIC18.39■□□□□ 0.53
BRF2Q9HAW0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 RN7SL471P-201ENST00000580476 299 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AC124016.1-201ENST00000609552 612 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AC004408.2-201ENST00000623613 2777 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AL020996.1-203ENST00000536896 2307 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 AC110285.5-201ENST00000611501 352 ntBASIC18.36■□□□□ 0.53
BRF2Q9HAW0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms