Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
BRF2Q9HAW0 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.39■□□□□ 0.54
BRF2Q9HAW0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 KRASP1-201ENST00000407852 552 ntBASIC18.39■□□□□ 0.53
BRF2Q9HAW0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY21P-201ENST00000433481 731 ntBASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.39■□□□□ 0.53
BRF2Q9HAW0 AC093503.3-201ENST00000624917 2352 ntBASIC18.39■□□□□ 0.53
BRF2Q9HAW0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 RN7SL471P-201ENST00000580476 299 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AC124016.1-201ENST00000609552 612 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AC006333.2-201ENST00000607957 2099 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AC004408.2-201ENST00000623613 2777 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 AL020996.1-203ENST00000536896 2307 ntBASIC18.38■□□□□ 0.53
BRF2Q9HAW0 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BRF2Q9HAW0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
BRF2Q9HAW0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 AC110285.5-201ENST00000611501 352 ntBASIC18.36■□□□□ 0.53
BRF2Q9HAW0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.36■□□□□ 0.53
BRF2Q9HAW0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms