Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC28.57■■■□□ 2.16
SCAF1Q9H7N4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC28.57■■■□□ 2.16
SCAF1Q9H7N4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
SCAF1Q9H7N4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
SCAF1Q9H7N4 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 RN7SL718P-201ENST00000581254 303 ntBASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 AC005786.4-201ENST00000623369 682 ntBASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC28.56■■■□□ 2.16
SCAF1Q9H7N4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 NOC2LP1-202ENST00000452600 2235 ntBASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 AL031133.1-201ENST00000406807 723 ntBASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 AC022726.2-201ENST00000634673 547 ntBASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC28.55■■■□□ 2.16
SCAF1Q9H7N4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 CLEC4GP1-201ENST00000596555 870 ntBASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SCAF1Q9H7N4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 HCG4P8-203ENST00000443049 980 ntBASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 AP002982.1-201ENST00000492365 877 ntBASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 DBP-204ENST00000599385 709 ntTSL 3 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC28.53■■■□□ 2.16
SCAF1Q9H7N4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 AP000593.1-201ENST00000393668 712 ntBASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC28.52■■■□□ 2.16
SCAF1Q9H7N4 AC099778.1-201ENST00000568593 1911 ntBASIC28.51■■■□□ 2.16
SCAF1Q9H7N4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms