Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM38AQ9H6F2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM38AQ9H6F2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.9■□□□□ 0.46
TMEM38AQ9H6F2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TMEM38AQ9H6F2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.89■□□□□ 0.46
TMEM38AQ9H6F2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 SOX15-203ENST00000570788 1093 ntBASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TMEM38AQ9H6F2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 WIZP1-201ENST00000531444 2299 ntBASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 AC009113.1-201ENST00000570267 2443 ntBASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMEM38AQ9H6F2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 AL138781.1-201ENST00000566567 1274 ntBASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 AC079598.2-202ENST00000546624 1451 ntBASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TMEM38AQ9H6F2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms