Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 SFXN5-211ENST00000474528 4072 ntTSL 1 (best)10.55□□□□□ -0.721e-6■■■□□ 18.6
CSTF2TQ9H0L4 SFXN5-201ENST00000272433 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.761e-6■■■□□ 18.6
CSTF2TQ9H0L4 POLE-208ENST00000535934 1561 ntTSL 513.21□□□□□ -0.292e-12■■■□□ 18.6
CSTF2TQ9H0L4 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.482e-12■■■□□ 18.6
CSTF2TQ9H0L4 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.552e-12■■■□□ 18.6
CSTF2TQ9H0L4 POLE-210ENST00000537064 8011 ntTSL 1 (best)10.28□□□□□ -0.762e-12■■■□□ 18.6
CSTF2TQ9H0L4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.53e-7■■■□□ 18.6
CSTF2TQ9H0L4 RGS12-210ENST00000506631 1530 ntTSL 1 (best)22.39■■□□□ 1.171e-6■■■□□ 18.6
CSTF2TQ9H0L4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.22■□□□□ 0.193e-9■■■□□ 18.6
CSTF2TQ9H0L4 UBXN6-209ENST00000592515 403 ntTSL 511.87□□□□□ -0.513e-9■■■□□ 18.6
CSTF2TQ9H0L4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.421e-6■■■□□ 18.6
CSTF2TQ9H0L4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.542e-7■■■□□ 18.6
CSTF2TQ9H0L4 PXDC1-203ENST00000477592 1697 ntTSL 515.86■□□□□ 0.132e-7■■■□□ 18.6
CSTF2TQ9H0L4 PXDC1-204ENST00000485986 532 ntTSL 211.61□□□□□ -0.552e-7■■■□□ 18.6
CSTF2TQ9H0L4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-7■■■□□ 18.6
CSTF2TQ9H0L4 TXNRD2-221ENST00000635155 858 ntTSL 513.15□□□□□ -0.39e-7■■■□□ 18.6
CSTF2TQ9H0L4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.574e-9■■■□□ 18.6
CSTF2TQ9H0L4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.171e-8■■■□□ 18.6
CSTF2TQ9H0L4 GATS-204ENST00000435519 1306 ntTSL 226.14■■□□□ 1.781e-6■■■□□ 18.6
CSTF2TQ9H0L4 GATS-202ENST00000414739 2007 ntTSL 1 (best)22.84■■□□□ 1.251e-6■■■□□ 18.6
CSTF2TQ9H0L4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.121e-6■■■□□ 18.6
CSTF2TQ9H0L4 GATS-211ENST00000543273 2840 ntTSL 1 (best)21.38■■□□□ 1.011e-6■■■□□ 18.6
CSTF2TQ9H0L4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.62■□□□□ 0.732e-7■■■□□ 18.6
CSTF2TQ9H0L4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.97■□□□□ 0.631e-6■■■□□ 18.6
CSTF2TQ9H0L4 GATS-201ENST00000328453 3526 ntTSL 1 (best)16.52■□□□□ 0.231e-6■■■□□ 18.6
CSTF2TQ9H0L4 SH3TC1-209ENST00000504822 259 ntTSL 415.06■□□□□ 07e-7■■■□□ 18.6
CSTF2TQ9H0L4 EEF1D-242ENST00000531953 506 ntTSL 411.68□□□□□ -0.542e-11■■■□□ 18.6
CSTF2TQ9H0L4 EEF1D-213ENST00000526133 367 ntTSL 29.34□□□□□ -0.912e-11■■■□□ 18.6
CSTF2TQ9H0L4 INTS11-227ENST00000525603 738 ntTSL 313.62□□□□□ -0.231e-11■■■□□ 18.6
CSTF2TQ9H0L4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.81■□□□□ 0.66e-7■■■□□ 18.6
CSTF2TQ9H0L4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.396e-7■■■□□ 18.6
CSTF2TQ9H0L4 PCGF3-206ENST00000433814 639 ntTSL 414.72□□□□□ -0.055e-7■■■□□ 18.6
CSTF2TQ9H0L4 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.732e-6■■■□□ 18.6
CSTF2TQ9H0L4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.982e-6■■■□□ 18.6
CSTF2TQ9H0L4 CBX4-203ENST00000494546 432 ntTSL 331.22■■■□□ 2.592e-8■■■□□ 18.6
CSTF2TQ9H0L4 PDXK-206ENST00000398085 796 ntTSL 320.5■□□□□ 0.874e-7■■■□□ 18.6
CSTF2TQ9H0L4 PDXK-212ENST00000470029 583 ntTSL 318.19■□□□□ 0.54e-7■■■□□ 18.6
CSTF2TQ9H0L4 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.41□□□□□ -0.264e-7■■■□□ 18.6
CSTF2TQ9H0L4 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.544e-7■■■□□ 18.6
CSTF2TQ9H0L4 PURA-203ENST00000505703 597 ntTSL 324.8■■□□□ 1.568e-8■■■□□ 18.6
CSTF2TQ9H0L4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.49■□□□□ 0.713e-6■■■□□ 18.6
CSTF2TQ9H0L4 NFE2L2-205ENST00000430047 451 ntTSL 321.86■■□□□ 1.094e-13■■■□□ 18.5
CSTF2TQ9H0L4 NFE2L2-210ENST00000462023 521 ntTSL 214.7□□□□□ -0.064e-13■■■□□ 18.5
CSTF2TQ9H0L4 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC9.98□□□□□ -0.814e-13■■■□□ 18.5
CSTF2TQ9H0L4 NFE2L2-214ENST00000588123 814 ntTSL 58.79□□□□□ -14e-13■■■□□ 18.5
CSTF2TQ9H0L4 NFE2L2-213ENST00000586532 942 ntTSL 57.15□□□□□ -1.264e-13■■■□□ 18.5
CSTF2TQ9H0L4 BSG-209ENST00000574970 570 ntTSL 420.44■□□□□ 0.864e-7■■■□□ 18.5
CSTF2TQ9H0L4 BSG-208ENST00000573784 559 ntTSL 417.9■□□□□ 0.464e-7■■■□□ 18.5
CSTF2TQ9H0L4 ABR-206ENST00000570441 690 ntTSL 510.24□□□□□ -0.773e-6■■■□□ 18.5
CSTF2TQ9H0L4 FLOT1-202ENST00000413165 856 ntTSL 518.96■□□□□ 0.632e-17■■■□□ 18.5
CSTF2TQ9H0L4 FLOT1-204ENST00000418160 457 ntTSL 314.41□□□□□ -0.12e-17■■■□□ 18.5
CSTF2TQ9H0L4 FLOT1-206ENST00000445853 792 ntTSL 1 (best)11.14□□□□□ -0.632e-17■■■□□ 18.5
CSTF2TQ9H0L4 KRT8-213ENST00000550170 2202 ntTSL 516.48■□□□□ 0.234e-10■■■□□ 18.5
CSTF2TQ9H0L4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.184e-10■■■□□ 18.5
CSTF2TQ9H0L4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.72□□□□□ -0.054e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-218ENST00000527118 700 ntTSL 314.72□□□□□ -0.054e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-205ENST00000445722 580 ntTSL 213.7□□□□□ -0.224e-10■■■□□ 18.5
CSTF2TQ9H0L4 KRT8-203ENST00000546583 2862 ntTSL 513.23□□□□□ -0.294e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.324e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-203ENST00000401893 762 ntTSL 211.88□□□□□ -0.514e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-215ENST00000524393 583 ntTSL 311.88□□□□□ -0.514e-10■■■□□ 18.5
CSTF2TQ9H0L4 ZNF441-203ENST00000462251 560 ntTSL 410.6□□□□□ -0.714e-10■■■□□ 18.5
CSTF2TQ9H0L4 ZNF441-202ENST00000409902 2828 ntTSL 210.02□□□□□ -0.814e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-201ENST00000373485 1417 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.054e-10■■■□□ 18.5
CSTF2TQ9H0L4 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.14e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-217ENST00000526193 568 ntTSL 48.01□□□□□ -1.134e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-206ENST00000458695 1674 ntTSL 2 BASIC7.37□□□□□ -1.234e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-211ENST00000477563 544 ntTSL 57.25□□□□□ -1.254e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.314e-10■■■□□ 18.5
CSTF2TQ9H0L4 RBBP4-214ENST00000492348 1547 ntTSL 26.42□□□□□ -1.384e-10■■■□□ 18.5
CSTF2TQ9H0L4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.591e-8■■■□□ 18.5
CSTF2TQ9H0L4 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.19□□□□□ -0.461e-8■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.638e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.458e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.45■□□□□ 0.388e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.01■□□□□ 0.318e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.288e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.278e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.5■□□□□ 0.238e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-212ENST00000592605 357 ntTSL 316.5■□□□□ 0.238e-11■■■□□ 18.5
CSTF2TQ9H0L4 C19orf25-208ENST00000589421 492 ntTSL 215.22■□□□□ 0.038e-11■■■□□ 18.5
CSTF2TQ9H0L4 MED22-208ENST00000610672 4367 ntAPPRIS P4 TSL 2 BASIC9.73□□□□□ -0.851e-15■■■□□ 18.5
CSTF2TQ9H0L4 YWHAZ-212ENST00000480304 2247 ntTSL 210.88□□□□□ -0.672e-8■■■□□ 18.5
CSTF2TQ9H0L4 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC10.18□□□□□ -0.782e-8■■■□□ 18.5
CSTF2TQ9H0L4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.33■□□□□ 0.21e-9■■■□□ 18.5
CSTF2TQ9H0L4 DMPK-206ENST00000588522 2920 ntTSL 515.97■□□□□ 0.151e-9■■■□□ 18.5
CSTF2TQ9H0L4 AC011530.1-203ENST00000597712 432 ntTSL 214.13□□□□□ -0.151e-9■■■□□ 18.5
CSTF2TQ9H0L4 AC011530.1-204ENST00000595946 321 ntAPPRIS ALT2 TSL 213.05□□□□□ -0.321e-9■■■□□ 18.5
CSTF2TQ9H0L4 AC011530.1-202ENST00000596586 397 ntAPPRIS P5 TSL 213.05□□□□□ -0.321e-9■■■□□ 18.5
CSTF2TQ9H0L4 THUMPD3-AS1-220ENST00000524210 2591 ntTSL 515.87■□□□□ 0.133e-15■■■□□ 18.5
CSTF2TQ9H0L4 TNRC18-206ENST00000434361 577 ntTSL 314.96□□□□□ -0.013e-8■■■□□ 18.5
CSTF2TQ9H0L4 GSE1-216ENST00000637419 2683 ntTSL 518.73■□□□□ 0.595e-7■■■□□ 18.5
CSTF2TQ9H0L4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.81■■□□□ 1.085e-9■■■□□ 18.5
CSTF2TQ9H0L4 GNB1-207ENST00000472614 708 ntTSL 221.21■□□□□ 0.995e-9■■■□□ 18.5
CSTF2TQ9H0L4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.835e-9■■■□□ 18.5
CSTF2TQ9H0L4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.355e-9■■■□□ 18.5
CSTF2TQ9H0L4 MICALL2-208ENST00000472100 5248 ntTSL 217.05■□□□□ 0.325e-7■■■□□ 18.5
CSTF2TQ9H0L4 SIRT7-215ENST00000574495 920 ntTSL 219.76■□□□□ 0.759e-9■■■□□ 18.5
CSTF2TQ9H0L4 PNCK-221ENST00000466074 1564 ntTSL 218.66■□□□□ 0.584e-7■■■□□ 18.5
CSTF2TQ9H0L4 ANKRD11-202ENST00000330736 8342 ntTSL 513.4□□□□□ -0.261e-7■■■□□ 18.5
Retrieved 100 of 19,151 protein–RNA pairs in 194.2 ms