Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 AC128676.1-201ENST00000454392 318 ntBASIC17.67■□□□□ 0.42
TRIM2Q9C040 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 AC098590.1-201ENST00000468126 897 ntBASIC17.67■□□□□ 0.42
TRIM2Q9C040 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM2Q9C040 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM2Q9C040 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM2Q9C040 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM2Q9C040 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM2Q9C040 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM2Q9C040 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM2Q9C040 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM2Q9C040 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TRIM2Q9C040 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM2Q9C040 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM2Q9C040 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.64■□□□□ 0.42
TRIM2Q9C040 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM2Q9C040 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM2Q9C040 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.64■□□□□ 0.42
TRIM2Q9C040 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM2Q9C040 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM2Q9C040 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM2Q9C040 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM2Q9C040 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM2Q9C040 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM2Q9C040 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM2Q9C040 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM2Q9C040 SDHAP1-207ENST00000440850 2000 ntBASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms