Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 AL512625.2-201ENST00000417533 625 ntBASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 AC006015.1-201ENST00000429970 570 ntBASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 AC060766.1-201ENST00000590824 627 ntBASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 AC008694.1-202ENST00000636953 945 ntBASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
KRTAP3-1Q9BYR8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 ANO7L1-203ENST00000602586 1720 ntBASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 HES2-205ENST00000487437 968 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AC091917.2-201ENST00000505002 744 ntBASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 GOLGA6L3-201ENST00000507199 1679 ntBASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
KRTAP3-1Q9BYR8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-1Q9BYR8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-1Q9BYR8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
KRTAP3-1Q9BYR8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-1Q9BYR8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-1Q9BYR8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
KRTAP3-1Q9BYR8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms