Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LRRC3Q9BY71 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 LINC01238-205ENST00000567549 1107 ntBASIC20.06■□□□□ 0.8
LRRC3Q9BY71 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC3Q9BY71 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 KRT8P45-201ENST00000414328 1447 ntBASIC20.05■□□□□ 0.8
LRRC3Q9BY71 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC3Q9BY71 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 AL441883.1-201ENST00000566170 1045 ntBASIC20.04■□□□□ 0.8
LRRC3Q9BY71 AL512604.3-201ENST00000569583 964 ntBASIC20.04■□□□□ 0.8
LRRC3Q9BY71 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC3Q9BY71 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 AL358472.4-201ENST00000633140 710 ntBASIC20.03■□□□□ 0.8
LRRC3Q9BY71 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC3Q9BY71 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms