Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCM2Q9BSQ5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 RCC2P6-201ENST00000526625 1557 ntBASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.92■□□□□ 0.62
CCM2Q9BSQ5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 FSCN1P1-201ENST00000568912 1481 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 KRT8P41-201ENST00000533985 1514 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 AC004951.3-201ENST00000418645 1148 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 AC116562.2-201ENST00000507042 360 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 AP003071.4-201ENST00000562276 1284 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 MIR6786-201ENST00000616843 113 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 AC116562.4-201ENST00000641316 2276 ntBASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.91■□□□□ 0.62
CCM2Q9BSQ5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 AC011506.1-201ENST00000474329 610 ntBASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 AC130371.2-201ENST00000619443 611 ntBASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 AL032819.2-201ENST00000624543 2162 ntBASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCM2Q9BSQ5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CCM2Q9BSQ5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.89■□□□□ 0.62
CCM2Q9BSQ5 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CCM2Q9BSQ5 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms