Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NPAS1Q99742 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NPAS1Q99742 AL596275.1-201ENST00000423464 877 ntBASIC17.52■□□□□ 0.4
NPAS1Q99742 AC004980.1-204ENST00000429707 299 ntBASIC17.52■□□□□ 0.4
NPAS1Q99742 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.52■□□□□ 0.4
NPAS1Q99742 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.52■□□□□ 0.4
NPAS1Q99742 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
NPAS1Q99742 CD177P1-201ENST00000606252 935 ntBASIC17.52■□□□□ 0.4
NPAS1Q99742 AP006294.2-201ENST00000641667 209 ntBASIC17.52■□□□□ 0.4
NPAS1Q99742 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NPAS1Q99742 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.52■□□□□ 0.4
NPAS1Q99742 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NPAS1Q99742 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS1Q99742 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS1Q99742 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
NPAS1Q99742 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.52■□□□□ 0.39
NPAS1Q99742 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NPAS1Q99742 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.52■□□□□ 0.39
NPAS1Q99742 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
NPAS1Q99742 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS1Q99742 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NPAS1Q99742 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS1Q99742 SNORA78-201ENST00000459373 127 ntBASIC17.51■□□□□ 0.39
NPAS1Q99742 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS1Q99742 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPAS1Q99742 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS1Q99742 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.51■□□□□ 0.39
NPAS1Q99742 AC073195.1-201ENST00000607241 877 ntBASIC17.51■□□□□ 0.39
NPAS1Q99742 AL445675.2-201ENST00000620291 557 ntBASIC17.51■□□□□ 0.39
NPAS1Q99742 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NPAS1Q99742 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.51■□□□□ 0.39
NPAS1Q99742 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NPAS1Q99742 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS1Q99742 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
NPAS1Q99742 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS1Q99742 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
NPAS1Q99742 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NPAS1Q99742 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 AL353807.1-201ENST00000427475 662 ntBASIC17.5■□□□□ 0.39
NPAS1Q99742 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.5■□□□□ 0.39
NPAS1Q99742 KSR1P1-201ENST00000446298 240 ntBASIC17.5■□□□□ 0.39
NPAS1Q99742 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NPAS1Q99742 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.5■□□□□ 0.39
NPAS1Q99742 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.5■□□□□ 0.39
NPAS1Q99742 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.5■□□□□ 0.39
NPAS1Q99742 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NPAS1Q99742 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NPAS1Q99742 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NPAS1Q99742 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NPAS1Q99742 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
NPAS1Q99742 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS1Q99742 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS1Q99742 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 AL032819.2-201ENST00000624543 2162 ntBASIC17.49■□□□□ 0.39
NPAS1Q99742 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 AL135905.2-201ENST00000584934 1404 ntBASIC17.49■□□□□ 0.39
NPAS1Q99742 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS1Q99742 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS1Q99742 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NPAS1Q99742 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.49■□□□□ 0.39
NPAS1Q99742 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NPAS1Q99742 Z85996.1-201ENST00000494644 937 ntBASIC17.49■□□□□ 0.39
NPAS1Q99742 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.49■□□□□ 0.39
NPAS1Q99742 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.49■□□□□ 0.39
NPAS1Q99742 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS1Q99742 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
NPAS1Q99742 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NPAS1Q99742 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms