Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 OR6D1P-203ENST00000641209 4860 ntBASIC16.17■□□□□ 0.18
CLCC1Q96S66 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CLCC1Q96S66 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.17■□□□□ 0.18
CLCC1Q96S66 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 AC026185.1-201ENST00000445748 174 ntBASIC16.16■□□□□ 0.18
CLCC1Q96S66 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 AP000997.3-201ENST00000623333 2250 ntBASIC16.16■□□□□ 0.18
CLCC1Q96S66 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 AC106820.2-201ENST00000563775 3264 ntBASIC16.16■□□□□ 0.18
CLCC1Q96S66 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CLCC1Q96S66 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.16■□□□□ 0.18
CLCC1Q96S66 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 MIR663A-201ENST00000385250 93 ntBASIC16.15■□□□□ 0.18
CLCC1Q96S66 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 OR10C1-204ENST00000622521 1039 ntBASIC16.15■□□□□ 0.18
CLCC1Q96S66 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CLCC1Q96S66 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.15■□□□□ 0.18
CLCC1Q96S66 AC018470.1-201ENST00000624790 3129 ntBASIC16.14■□□□□ 0.18
CLCC1Q96S66 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CLCC1Q96S66 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 KRT18P68-201ENST00000392293 1000 ntBASIC16.14■□□□□ 0.17
CLCC1Q96S66 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 AC105036.2-201ENST00000569468 176 ntBASIC16.14■□□□□ 0.17
CLCC1Q96S66 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.14■□□□□ 0.17
CLCC1Q96S66 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CLCC1Q96S66 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.14■□□□□ 0.17
CLCC1Q96S66 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
CLCC1Q96S66 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms