Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR4651-201ENST00000582622 73 ntBASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 AL353708.3-201ENST00000610272 989 ntBASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 CROCCP3-202ENST00000420820 1947 ntBASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PDLIM5Q96HC4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 AC093503.3-201ENST00000624917 2352 ntBASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PDLIM5Q96HC4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 Z85996.1-201ENST00000494644 937 ntBASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
PDLIM5Q96HC4 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 NIFKP9-201ENST00000419265 221 ntBASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 TSPY23P-201ENST00000440136 739 ntBASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 AC004408.2-201ENST00000623613 2777 ntBASIC18.77■□□□□ 0.6
PDLIM5Q96HC4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM5Q96HC4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM5Q96HC4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM5Q96HC4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PDLIM5Q96HC4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PDLIM5Q96HC4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms