Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.27■□□□□ 0.68
SIPA1Q96FS4 AC099778.1-201ENST00000568593 1911 ntBASIC19.27■□□□□ 0.67
SIPA1Q96FS4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SIPA1Q96FS4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 HOMER2P1-201ENST00000455653 964 ntBASIC19.26■□□□□ 0.67
SIPA1Q96FS4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SIPA1Q96FS4 KRT8P45-201ENST00000414328 1447 ntBASIC19.25■□□□□ 0.67
SIPA1Q96FS4 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 UPK3BP1-201ENST00000428678 509 ntBASIC19.25■□□□□ 0.67
SIPA1Q96FS4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 AL023973.1-201ENST00000624619 620 ntBASIC19.25■□□□□ 0.67
SIPA1Q96FS4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
SIPA1Q96FS4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SIPA1Q96FS4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 AL441883.1-201ENST00000566170 1045 ntBASIC19.23■□□□□ 0.67
SIPA1Q96FS4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SIPA1Q96FS4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms