Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 AL354751.1-201ENST00000412768 1863 ntBASIC18.29■□□□□ 0.52
LRRC58Q96CX6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 LSM12P1-201ENST00000411836 588 ntBASIC18.29■□□□□ 0.52
LRRC58Q96CX6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.29■□□□□ 0.52
LRRC58Q96CX6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRC58Q96CX6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 KRT18P5-201ENST00000436075 1291 ntBASIC18.28■□□□□ 0.52
LRRC58Q96CX6 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 AL133373.2-201ENST00000623187 2828 ntBASIC18.28■□□□□ 0.52
LRRC58Q96CX6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.28■□□□□ 0.52
LRRC58Q96CX6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRC58Q96CX6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 AC087623.3-201ENST00000607047 1098 ntBASIC18.27■□□□□ 0.52
LRRC58Q96CX6 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRC58Q96CX6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LRRC58Q96CX6 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC58Q96CX6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRC58Q96CX6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRC58Q96CX6 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRC58Q96CX6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms