Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 SDHAP1-207ENST00000440850 2000 ntBASIC18.47■□□□□ 0.55
VPS33AQ96AX1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VPS33AQ96AX1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 AC124283.5-201ENST00000624661 1809 ntBASIC18.46■□□□□ 0.55
VPS33AQ96AX1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
VPS33AQ96AX1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
VPS33AQ96AX1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 FP475955.4-201ENST00000623131 1990 ntBASIC18.45■□□□□ 0.54
VPS33AQ96AX1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 AC133552.2-202ENST00000575694 574 ntBASIC18.45■□□□□ 0.54
VPS33AQ96AX1 AC022517.1-201ENST00000592429 346 ntBASIC18.45■□□□□ 0.54
VPS33AQ96AX1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
VPS33AQ96AX1 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 MKRN4P-201ENST00000444706 1521 ntBASIC18.44■□□□□ 0.54
VPS33AQ96AX1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
VPS33AQ96AX1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
VPS33AQ96AX1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms