Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX33Q8WV41 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX33Q8WV41 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX33Q8WV41 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX33Q8WV41 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX33Q8WV41 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.33■□□□□ 0.37
SNX33Q8WV41 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.33■□□□□ 0.37
SNX33Q8WV41 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX33Q8WV41 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNX33Q8WV41 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNX33Q8WV41 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.33■□□□□ 0.37
SNX33Q8WV41 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 C2orf69P4-201ENST00000565394 541 ntBASIC17.33■□□□□ 0.36
SNX33Q8WV41 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX33Q8WV41 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNX33Q8WV41 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX33Q8WV41 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX33Q8WV41 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.31■□□□□ 0.36
SNX33Q8WV41 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
SNX33Q8WV41 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX33Q8WV41 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.31■□□□□ 0.36
SNX33Q8WV41 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX33Q8WV41 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX33Q8WV41 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX33Q8WV41 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 AC060766.5-201ENST00000590539 871 ntBASIC17.3■□□□□ 0.36
SNX33Q8WV41 HLA-B-256ENST00000639848 1089 ntBASIC17.3■□□□□ 0.36
SNX33Q8WV41 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SNX33Q8WV41 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SNX33Q8WV41 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms