Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 AC026366.1-201ENST00000488803 879 ntBASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 KRT18P6-201ENST00000555540 1265 ntBASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 AC104417.2-201ENST00000562989 1793 ntBASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP1Q8TDR0 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 AC069544.1-201ENST00000609399 999 ntBASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 NBPF21P-201ENST00000425093 1451 ntBASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 TEX21P-204ENST00000641479 1693 ntBASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP1Q8TDR0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
TRAF3IP1Q8TDR0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF3IP1Q8TDR0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRAF3IP1Q8TDR0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
TRAF3IP1Q8TDR0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.02■□□□□ 0.79
TRAF3IP1Q8TDR0 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 AC004264.1-201ENST00000608354 794 ntBASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 AC141586.3-201ENST00000562166 1838 ntBASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP1Q8TDR0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 SDHAP1-207ENST00000440850 2000 ntBASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
TRAF3IP1Q8TDR0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms