Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 GAD2-202ENST00000376248 680 ntTSL 5 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 LINC01311-201ENST00000565162 1445 ntBASIC14.96□□□□□ -0.01
LINC01006Q8NI28 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.96□□□□□ -0.01
LINC01006Q8NI28 HYMAI.1-201ENST00000620949 238 ntBASIC14.96□□□□□ -0.01
LINC01006Q8NI28 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
LINC01006Q8NI28 AC104417.2-201ENST00000562989 1793 ntBASIC14.96□□□□□ -0.02
LINC01006Q8NI28 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 GABARAPL3-202ENST00000624044 1851 ntBASIC14.95□□□□□ -0.02
LINC01006Q8NI28 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 DUSP5P1-201ENST00000441325 1139 ntBASIC14.95□□□□□ -0.02
LINC01006Q8NI28 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 MIR4674-201ENST00000582457 87 ntBASIC14.95□□□□□ -0.02
LINC01006Q8NI28 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 AL121894.2-201ENST00000602977 491 ntBASIC14.95□□□□□ -0.02
LINC01006Q8NI28 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC01006Q8NI28 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 AL137060.1-201ENST00000618151 2648 ntBASIC14.94□□□□□ -0.02
LINC01006Q8NI28 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.94□□□□□ -0.02
LINC01006Q8NI28 CR769767.2-201ENST00000622735 460 ntBASIC14.94□□□□□ -0.02
LINC01006Q8NI28 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01006Q8NI28 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms