Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM42Q8IWZ5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 AC116351.2-201ENST00000606540 1585 ntBASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 KRT18P11-201ENST00000435214 1283 ntBASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM42Q8IWZ5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM42Q8IWZ5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.14■□□□□ 0.66
TRIM42Q8IWZ5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM42Q8IWZ5 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM42Q8IWZ5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM42Q8IWZ5 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms