Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 EP400NL-214ENST00000641289 2402 ntBASIC27.42■■□□□ 1.98
UBR1Q8IWV7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC27.42■■□□□ 1.98
UBR1Q8IWV7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 LINC00265-3P-201ENST00000447588 903 ntBASIC27.41■■□□□ 1.98
UBR1Q8IWV7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 ANKRD18DP-204ENST00000455355 1975 ntBASIC27.41■■□□□ 1.98
UBR1Q8IWV7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 TSPY22P-201ENST00000427496 604 ntBASIC27.41■■□□□ 1.98
UBR1Q8IWV7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC27.41■■□□□ 1.98
UBR1Q8IWV7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 KRT18P31-201ENST00000506277 1292 ntBASIC27.4■■□□□ 1.98
UBR1Q8IWV7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC27.4■■□□□ 1.98
UBR1Q8IWV7 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 AL391807.1-203ENST00000604392 2365 ntBASIC27.39■■□□□ 1.98
UBR1Q8IWV7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
UBR1Q8IWV7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
UBR1Q8IWV7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC27.39■■□□□ 1.97
UBR1Q8IWV7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
UBR1Q8IWV7 AKR1C7P-201ENST00000305623 895 ntBASIC27.38■■□□□ 1.97
UBR1Q8IWV7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 HLA-A-201ENST00000376802 1334 ntBASIC27.38■■□□□ 1.97
UBR1Q8IWV7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 AP005212.1-201ENST00000581547 1997 ntBASIC27.38■■□□□ 1.97
UBR1Q8IWV7 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC27.38■■□□□ 1.97
UBR1Q8IWV7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 AC104417.2-201ENST00000562989 1793 ntBASIC27.37■■□□□ 1.97
UBR1Q8IWV7 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 MIR662-201ENST00000384847 95 ntBASIC27.37■■□□□ 1.97
UBR1Q8IWV7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 MIR3180-5-201ENST00000583743 153 ntBASIC27.37■■□□□ 1.97
UBR1Q8IWV7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
UBR1Q8IWV7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
UBR1Q8IWV7 FOSL1P1-201ENST00000511041 816 ntBASIC27.36■■□□□ 1.97
UBR1Q8IWV7 AP000867.3-201ENST00000524675 377 ntBASIC27.36■■□□□ 1.97
UBR1Q8IWV7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms