Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 TSPY23P-201ENST00000440136 739 ntBASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 CA15P1-201ENST00000481698 905 ntBASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 AL158211.5-201ENST00000623583 2518 ntBASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCDC60Q8IWA6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
CCDC60Q8IWA6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCDC60Q8IWA6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 HMGA1P5-201ENST00000412453 271 ntBASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 AL353719.1-201ENST00000566847 864 ntBASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 AC010653.2-201ENST00000623505 997 ntBASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.38■■□□□ 1.01
CCDC60Q8IWA6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 TSPY17P-201ENST00000450329 467 ntBASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 Z82202.1-201ENST00000623446 1880 ntBASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCDC60Q8IWA6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CCDC60Q8IWA6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms