Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 RARRES2P10-201ENST00000564312 460 ntBASIC18.9■□□□□ 0.62
SYVN1Q86TM6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SYVN1Q86TM6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SYVN1Q86TM6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SYVN1Q86TM6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.89■□□□□ 0.62
SYVN1Q86TM6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 REXO1L12P-201ENST00000622156 912 ntBASIC18.89■□□□□ 0.61
SYVN1Q86TM6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SYVN1Q86TM6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 MIR4785-201ENST00000585005 73 ntBASIC18.88■□□□□ 0.61
SYVN1Q86TM6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 TEX21P-204ENST00000641479 1693 ntBASIC18.88■□□□□ 0.61
SYVN1Q86TM6 ZNF815P-204ENST00000434898 1737 ntBASIC18.88■□□□□ 0.61
SYVN1Q86TM6 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SYVN1Q86TM6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TSPY7P-201ENST00000431358 1114 ntBASIC18.87■□□□□ 0.61
SYVN1Q86TM6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 AL121829.2-201ENST00000620908 328 ntBASIC18.87■□□□□ 0.61
SYVN1Q86TM6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SYVN1Q86TM6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SYVN1Q86TM6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.86■□□□□ 0.61
SYVN1Q86TM6 AL161938.1-201ENST00000569833 2180 ntBASIC18.86■□□□□ 0.61
SYVN1Q86TM6 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.86■□□□□ 0.61
SYVN1Q86TM6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SYVN1Q86TM6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms