Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC11.89□□□□□ -0.51
VPS13BQ7Z7G8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 AC104417.2-201ENST00000562989 1793 ntBASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PRELID1P1-202ENST00000567272 903 ntBASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 FGF14-AS2-201ENST00000606448 1074 ntBASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 KRT8P8-201ENST00000434750 1448 ntBASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC11.88□□□□□ -0.51
VPS13BQ7Z7G8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 STARP1-201ENST00000397973 869 ntBASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 KRT18P31-201ENST00000506277 1292 ntBASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
VPS13BQ7Z7G8 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 KRT16P6-202ENST00000425692 1426 ntBASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VPS13BQ7Z7G8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms