Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 AC004911.1-201ENST00000416316 871 ntBASIC17.37■□□□□ 0.37
SHFQ7M4L6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 WIZP1-201ENST00000531444 2299 ntBASIC17.37■□□□□ 0.37
SHFQ7M4L6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SHFQ7M4L6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.37■□□□□ 0.37
SHFQ7M4L6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 GPX1P1-201ENST00000388829 606 ntBASIC17.36■□□□□ 0.37
SHFQ7M4L6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 AF201337.1-201ENST00000520239 748 ntBASIC17.36■□□□□ 0.37
SHFQ7M4L6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 MKRN4P-201ENST00000444706 1521 ntBASIC17.36■□□□□ 0.37
SHFQ7M4L6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.36■□□□□ 0.37
SHFQ7M4L6 AC116351.2-201ENST00000606540 1585 ntBASIC17.36■□□□□ 0.37
SHFQ7M4L6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SHFQ7M4L6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 FP475955.4-201ENST00000623131 1990 ntBASIC17.35■□□□□ 0.37
SHFQ7M4L6 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 AL390719.1-204ENST00000412397 1219 ntBASIC17.35■□□□□ 0.37
SHFQ7M4L6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 AC080038.1-201ENST00000611274 1154 ntBASIC17.35■□□□□ 0.37
SHFQ7M4L6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SHFQ7M4L6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.35■□□□□ 0.37
SHFQ7M4L6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.34■□□□□ 0.37
SHFQ7M4L6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SHFQ7M4L6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
SHFQ7M4L6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms